| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT1787 | chr2L 3475934–3478473 (2539 bp) | pgant4, CR43928 |
      active |
head epidermis lateral anlage, dorsal epidermis anlage broad, lateral epidermis anlage broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 2 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | head epidermis lateral anlage | 4 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 9-10 | dorsal epidermis anlage broad | 4 |
| 9-10 | lateral epidermis anlage broad | 4 |
| 9-10 | ventral epidermis anlage broad | 4 |
| 9-10 | amnioserosa anlage | 4 |
| 9-10 | head epidermis ventral anlage | 4 |
| 9-10 | head epidermis dorsal anlage | 4 |
| 11-12 | ventral midline | 3 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral epidermis primordium broad | 3 |
| 11-12 | dorsal epidermis primordium broad | 3 |
| 11-12 | lateral epidermis primordium broad | 3 |
| 11-12 | head epidermis primordium broad | 3 |
| 13-14 | amnioserosa | 4 |
| 13-14 | ventral nerve cord broad | 3 |
| 13-14 | brain subset | 4 |
| 15-16 | amnioserosa | 3 |
| 15-16 | brain broad | 3 |
| 15-16 | ventral nerve cord broad | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0051956 | pgant4 | 597bp downstream | BDGP FlyBase |
| FBgn0264549 | CR43928 | 917bp upstream | BDGP FlyBase |
| FBgn0261560 | Thor | 2500bp upstream | BDGP FlyBase iFly |
| FBgn0051776 | CG31776 | 3570bp downstream | BDGP FlyBase |
| FBgn0031542 | CG15414 | 4821bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gcggagatgggggtcttatttgcttcggaagattccctttgttagggcagttcacttgttgatgggcgtttggtaatagataacaaaaatggtcaagtagtacttgtatatctgcgagttttcttggaaacttacttaccactgaataaaatgtgatttccatcttaagtaggatgggtagataataagctatatgatattcactctataaataatttgaattggtaaaccacaatacatagtcctaaatacctttatattatattgcaataatacagcacattcattgatttgattaccacgtgtatttggcagagtatataaatatcattggacttttttgtttacgtttctcatggttttcgctctagccgaaaaatataaacaagtcgatgtcgtctagcccattcacaaccatctcagactcgtttgggaatagaacccaccgatggtaatgacccaccgttcgtccgtatgtttcacgcaattcgatggtgcaatttcatcagcctccccgaaaaagatttcatccgaatttcactatatatgtacgtatgtattacctgtcccccggcggatgggaaaaacacccctcggcgcttagagaaccggctaggaatatctcaagacgcattttaacttggctgcaacgcagtaggaaaactgcctgccgtctctttcctcgcggctataggcctgtctctctctctttgcgcaggtacatcatattgtatctgatgaaaacgaaagcaaaatccgaactggtttcttcgagggttgataagccctaatggaggtggaaaatgcggagaagagccgctctctcacccaaaaaataaaatatataaacatatcagccggcacgtagggcggtttctatgctgtggactacgtgctagatgacacggcaaaattgtccgtgtttttcgtgttctggctcccttgtttaccgtttactactttgggggtcagttggcacccagctaactcccacccccatctagtgtaattgatggatttgggtcatgctttccccaattcaaatatgctcctcgtcacatggaaatctactttcaaggtctgtcaagcttccccatttagccatcataaatattagcacgcttaagtatcgaccttgtgcagatttctaggtgggcgccatcccctgtcccacatcgagatcatgatcgccgcagatcaacacacgtggccaccttttgtcaaccccatatccctcggaatggcccgtggccaatatccgaattacgtcgaatcgtgggcgccaacgtaggcaaaagttcctgtagcactatttacatgcgtccaacgattaaatatcgtcaacatcgcccccgcatagctaaaaccgctcgtgccgctgcttggatccaccctatgcttgctgcgatcagtggggcatattagtttgattccaaacaagatattccacctcaaagaacttgggaactaataagggttcgatcaccaaatttggtgatatgatatatgtatttctttagatatgtgcgctaatattaaacggctaagaagtcaatgtgccaaagaaaagatattaaatatgtatgtttcatatcagtcaagttaaattttgatatgagctaagcgtacttttggattgtgcactcctaaatatagaaatcacgctaaaattgcatatctaagtaaataaagcaagtaagttatgtaagacgtgtatcttttcgtgataattatttcaaaacggctcgtgccagataataatgaacactttccgcctgaaaaaaagtgaaatgctgggtatcttttagcccataaaaacctgcaatatcgttgctcaaattgctatgctccgcgagttcgcacatgcatagaaggcactcatagcctacgtcacgattgccggcgacgtgtctttatgctaattaatggtatttcgcgaaaacgagtgcaaaataatggccccatggagagagcggcagtacttcacgaaattctgcggaacacctcttgactcccagacagccatagataagatcccaattgcacctgagtcatcatcatttccctagcaagatcgacaatagacttggtttttagaaaagaatgcgattggcgtttagtgctgttggctaacttgtttaccaataatattgccgtgcattaaacaataacaaatgaccaaagataaacaagagctcaaggcgagaagcccctcaagacagccccccaccatcgctacaccccttatcatctagaacctccgaggtgtgcaggctgcaacaaaaataagaacaataggggaatatattagaatacggcaataacaacaagaaccagccggtttgtcataaactacgcagaaaatacaccagataaaaacaaaaaacatcagccgaccaagcagaataatcaggcgagagagcaggcgaaagagcgagaagagagcgagagagagtaagaatgggggggtataaatagagccacacttcgtaataccgccagcaatcgcctagcgaacagccaacggtgaacacatagca
PCR verification status
Line verified as correct.