Fly Enhancers @ Stark Lab

ID	Coordinates*	Neighboring genes	Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16)	Strongest annotations	Order
VT18573	chr2R 14016005–14016895 (890 bp)	Dip3, Spn55B	active	head mesoderm anlage, brain broad, ventral nerve cord broad	VDRC

Annotations

stage	annotation term	intensity
4-6	not active	0
7-8	head mesoderm anlage	2
9-10	brain anlage subset	1
9-10	ventral nerve cord anlage subset	1
11-12	brain primordium broad	1
11-12	ventral nerve cord primordium broad	1
13-14	brain broad	2
13-14	ventral nerve cord broad	2
15-16	not active	0

Whole-slide images

All stages Quality: OK

All stages Quality: LOW

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Neighboring genes

gene ID	gene name	distance	links
FBgn0040465	Dip3	overlapping	BDGP FlyBase iFly
FBgn0028983	Spn55B	291bp downstream	BDGP FlyBase
FBgn0001222	Hsf	1803bp upstream	BDGP FlyBase iFly
FBgn0003520	stau	2722bp downstream	BDGP FlyBase iFly
FBgn0003044	Pcl	6926bp upstream	BDGP FlyBase iFly

UCSC snapshot

Sequence

ccaaaacgaagagaacgcaggagagtcgaacggtaaatcggtcgcagcaacataaacttttagaatcgccagcgagagccgtcttaaaagtgcgaatacaaacagaaggaaaagcggccgcctatggcaacctgactagcaaaacattcgaaagcaattggccaaagttaggacgaaatgagccgaaagaacggaaaccaggacacctttcccaagacggagaagatgcagcgctactacgcggagcgcgagaccacaggacccgagttcggtgagttttcctcggttcgcaatcggtacacaatggattcagaaatggaatctgagtaaccggggctcgcagaatcaacccccaaagccaaaggatgtgtcttctgcgcttaggggttgctgtttctgcggcgaagaaacgtagaaacggaattagaaaaccgaaacagattttaacgatttttcccacaaatccttgctcccagacgatcgcctgataaagcttgtgcgcgccaatccggccatctatgatgtcagccatccgcactatcgccgtaatccggtgcgggtggacatatgggatcgcattgccaacgaactgggcgcctcctgtgagtatattgcattttatccactgcgtagattctgtcgataaaaccaccccattttttctacgcccacttcacagcccgatttctgcaaaccaaatggaagaacatacgatacaactatctgcaggaggtcaaggcgattgagacgggccaggcgaatccgaacgtacgcaagcggcgcttcactgaggatctatcctttctgcagaacacggcccaaacctacaatgtgaagaaatcccagagctacgtggcccaacagaatggaatgggaagtgacaacgacagc

PCR verification status

Line verified as correct.

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