Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT19021 chr2R 14899853–14901945 (2092 bp) tn, 5-HT1B activityactivityactivityactivityactivityactivity
active
trunk mesoderm AISN broad, head mesoderm anlage, pharynx VDRC

Annotations

stageannotation termintensity
4-6trunk mesoderm AISN broad3
7-8head mesoderm anlage3
9-10ventral nerve cord anlage subset1
11-12not active0
13-14not active0
15-16pharynx2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265356tn3405bp downstream BDGP FlyBase
FBgn02631165-HT1B9977bp upstream BDGP FlyBase iFly
FBgn0263473snoRNA:abba-a17507bp downstream BDGP FlyBase
FBgn0263083CG4335117661bp upstream BDGP FlyBase
FBgn0034413CG1511523144bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ataagtgggccggagtagcgatgagtggctcactcggtttcaatcaaaaattacacggcaagcggagaaagtcgattccagggaaaccagctttctctatttcgagagctcacacatgcgatggctgatggcgtgcgattgtgtgtgtgagtgttcttaaccttttgtggcaggtgctcctcaaagcttccataccgccaccctgccacccggccatcctgccgccttccagcattcgtttccgctctccttccagtttcctttgccacttgccatttcccatttcccgatgccgactgcacttggtggtacatttaataccacttgagtgactttttatggccagcaacgtagtcatgtgtgtttgtgaggggatctctgtatgtgtgtgtatatgtatctatgatagcccggtttgttttgttctgttttgtttttgtgttcatttggacttagccttgccatttgtccgccgtttgttagttttttcctcctgttgttttagtttgtatattttaaaccaccttttttttgcaacgtgtcagacatttttatatgcatccaacagcagccagaacttttcacttttattatttccattttgaactggcttttgttttcgttctcgtggcaaaaagagagcatctggctgcatttaaataaatattttaataaataatatgctcagatctagccgtgaccacatctgctgaagagatttcgattttcgggataactactctccattcatggccaaatctcaactaccaacagttcgaagaatcaacaggaatttccacgagcaaggcgcacacggtaaaatctgggtaaatagcactgcaatagataaagagtctttttccctcacacacaaaggcgaagtagacgagaagaactaactttcggagagttctggataaataatgggagaatgaggtgctgcaaagctaaggggaaacacattggaaagtgctttttagtttgcgtaaatcaaagtaagagaaaattaaacttcaagccaaaagctgcttacagtttcgagcactaaatggatttggacacggaatggcaatggtatttttgaaggtgagatatcatttgatgtagtttcaggcatttgataatcacatctgcggctatgtaataataataagaaatatggaagtaaaacatataatttcatttaattagttggtatctatccacttaaacagttaactagcgagtattgttaccttaaaagatccagcaattgaaattaaatttcagttacgcaatgccaaggcaatgttttcaggacctgcattaggtaattacattgattgttggggcgatacctggctgaggtcaagactgtttgtatagcccaatggtaggatgtggaccatatgtgcgctcgcatggtagatatactatatctaacccatggcgtgggtcagaggtcagtgtctcgctggagctggggagaaaagcaggctaaaagagcaccatcagcagctgcttggcttttgttgacgaattaacatttatcatgcgccacgtgaaatccatttatcacatccagccccggattcctattccattttcgctgttgcacaaaaacaaaggcctcgcaaatcagcacagaaatcgcattgatattattcgtattcgtatttggggtctatttcgattcatcaaaaaggcaccacgctcccattttatgttaataaaaacagacgaaccactggcaacaggaaggcccccggattgaccttggcaatggtcgtttgtctggccggggggtttcactcctggcatttgatttatatttaaatgcctatcggggtcacctcgtgttcataactctttgtatcggccaatttatcatacagcgtcctttggtgttaaattgaaattccccacagtgccgtcccttgatttccctacctaaatttggtagctctgtggctttacaaaggcattcagactttaagagcttttcaaacgtacacgtcacaaaatttatttttgtacccaaatgtatattataaattgatattgtaataagtaataagatacagctgatacgttaagttaaaatgaatgtggcc

PCR verification status

Line verified as correct.

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