| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT19075 | chr2R 14998559–15000822 (2263 bp) | 5-HT1A, CG15117 |
      active |
anterior endoderm AISN, posterior endoderm anlage, anterior endoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 7-8 | trunk mesoderm anlage subset | 3 |
| 9-10 | not active | 0 |
| 11-12 | not active | 0 |
| 13-14 | not active | 0 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004168 | 5-HT1A | overlapping | BDGP FlyBase iFly |
| FBgn0034417 | CG15117 | 11177bp upstream | BDGP FlyBase |
| FBgn0050125 | Ir56a | 14881bp downstream | BDGP FlyBase |
| FBgn0027535 | botv | 18535bp upstream | BDGP FlyBase |
| FBgn0034418 | CG15118 | 22673bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ccaaaaatcgctgcgttcattttgtcgaccatttttgtgggtaaaaagggtattggccagtataaatttcaatctaattgcctttgcattcggtatgtttattggcaaattgttaaataattcgatggcacaaagctgcctaatcgaattcacatatgtatatgtaacaatcattggacaaaactaatttttcgccaaaacacgatgtttgtatttttaattaaaatgtaattttcatgccggtcacacgcacattgattttccaattaactgatggccaaacagcaattaagccaaacaggtattatccttaatttagctattggcattatgttcggtccaacggccggcaaatgctatttataatccagcaaaacgaagtgaaccaaatgccccagggcaatataccatcattacaatcacatttgcaagaacatctcgaattgattgctccagatattgacactattttcatagccaaacatgtgacagaacagtcgaggccttgagttcgcatgagtgaaaagcatatttggctaactcgccatctgtgacacacgaagacgtgtttgtgtctgcgctcgaaagaggaaaatacttgagaaaatcaatagaaaaaatgaacagcaaaatttccagaaaaattatattcagaaataatttgcagtactttacaaaaatgcactcttaaagacgaaacttttgttatttgtgtatgtaaaattacatacacaatttcactttcaattaccgcatcgattaaaataataataatataattattaattattaatttataacaaaacaatcaatgcaaacgctttgatccattccattcaaaggcaaatctggacaaaaattgaaattatttttagaaaaaaatgcagtctccattgtgcgtcagttgaggccgaggcttgcatttgatttttctgttatttattgcggatttattttaatttttgcctagatgccttcgcagcgggacccttggcccgttggagccataaattttgttgcccagtgtagttaataccagagcattcttgtcacactcaggactaacataaatcgcatggaaacacattattgaatacacgcacatacgtacgtaggcatttctttcgcaggccgaacatgtgtcccggcaagaaaaacaattaaataagaaaacaatttacataaattagctaaagtgccagaaatggctaaggaccaaggagtcgggactagagaatgagtgtatcgtttatgcaaacgcttaaatacacagaaaaacagttggctgacagcacatctgcataaaattcacattgagccgaggttttctatccgcatccttatcgttattgccaaactgctgaaaagagagctcttatcgctcttatcacgtgcatgtgtgtgtgtgtgtgtgttggccatgtttgctttgctattttggtatttaagtaacagacaagagcatagatactttagttttcccgaaaggagacttgctccgcatttgctttttttttgttttgccatgaaattaatggctttgctcttgcacttcaaatttatctaggtggaatattcaatgaaacttttccttcagtcagcaaatgaaatttaatactggccttaacttgaagcctgttatttattaatttcgaacagacagcaaactcccactgggccatctcatttgccgccctttctgctcgtgcctaattaagcttaaactcttcaatatttaataagctatctgaccgtagaacttttacttctactttggcaacccacaaggcacttgactaagattttcttcctcaatttggccatagttgctggcccacaaaatgaaggtcacacacacatgggtcatgctgtaaacccatttaatactatttgcgcaaatattcacaccacttttggatcgccatcgaatcggaaccctttgccttttcccccaacgctaaaaattcccgcacacgaaggcaaaatcagcataattttatttatttaaagcaatatcgacttgccaaaagggtcaacaatcggaggctaaggcgacaaagatgacgaggacgatggcaaagggttggactactcaattactttaatttggtgcgattgaggcgacaaaaatacgcacacaaagaggatatatttagaaaataagaaagccgaagtatttatgcactgtataatgctaagcatactaaagtataataatttctgttttattcaagaatgctaacccatatcagcatcaggaagca
PCR verification status
Line verified as correct.