Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT19419 chr2R 15688795–15690914 (2119 bp) tRNA:K2:56EF, Obp56h activityactivityactivityactivityactivityactivity
active
head subset, brain primordium subset, ventral nerve cord primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10head subset3
9-10ventral nerve cord anlage subset2
11-12brain primordium subset3
11-12ventral nerve cord primordium subset3
13-14head subset3
13-14ventral nerve cord subset3
13-14brain subset3
15-16head subset3
15-16ventral nerve cord subset3
15-16brain subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0011897tRNA:K2:56EF1301bp upstream BDGP FlyBase
FBgn0034475Obp56h14264bp upstream BDGP FlyBase
FBgn0034474Obp56g17248bp downstream BDGP FlyBase
FBgn0034476Toll-725288bp upstream BDGP FlyBase
FBgn0034473Or56a30058bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gttattgttgcatggcttgcgggcttgaaaaaatatttttatttaatttatttatgaatgaagcgaagggcgccggtatgtcctgggtggttgggttggtaggcctggtaggcaataaaggcgttgccacacactccccgaaaaccattaccatttcgcttgtggtgcctaccgcattgtcacatagataagccgcgtctggcttaactcataaaaaagtgccggcaaaaggataataaaccagccagaccgaaggagagaacgcgtgcggatttaaatttcacaaaaataaacagcaatagccataaacgggggaagctgtaggccagagttgagccgcatggtgggaaaaatattcttattctacacaatccgtttagatatgtttccattttaaatgcctcaataatgacaataatcaaaaattctcagacccagagtacccgttccggcttttgttatttaccgccccacaggccgcgaagactgagaaatgaatttaaaatcaatttgcggtcagctcacaaaagcagccatgaggtaaaccgcaaagacaacaattaagcgtaacaaatgattatgaataaccttttttctacgcacggaatgccatgtatgttcttctgtgagaaacggaaccaaaatctaatgatatttttgacggggcttggccggccggcgagttgtgctgatgaatgaaactcaggaatttaaaaatactacagccttgtaaatgagtagacagaatgtctggctgaggaaaagaatatttatagaatgtgcaactaaaaccatttttaactctagaacggaattatattataattattagatagaaatgatttcgatttgaaaacaactatggttcattatataataataataaactccctacgtggggctcgaacacacgaacttgggactactaacaaagagctcccaaagtatatttttatacctggtggatatttatttttagaacgagattttcatcttgtgttgttatcatggcctttgggaaattcaacgtggttatgttgtaataagatataaatcaaacacatacacagacattctgtgcgttagttatttatggtagaattttaacatcgatgttaaactaattaagtttatttcgataccacaagaatggatttctatgacaatatatattaaaatgtatttacatatgtacatatgtagggccaaggaagtgtaaacgcctgaccgagctaccaagaagtcatccctaccacggaggctctcgtttcttatgcgccaattgcggtaacccatcatgtgcccggctagctcagtcggtagagcatgagactcttaatctcagggtcgtgggttcgagccccacgttgggcgaaacaaattttttgttaattttttgttccttaccaaatcaaagaaaacctttccataaaataaatttgccacatggcataaaaaaaaaaaaacaaagctgctggcacatattaaatatattatttgaaaatttttttttaatttgttttaaattaatttggctgacaaatatttgtgggatgcttgcaagtgaaagccattgttgaagtagcacaaaagcgggcatgcataaatccgcagccattgaaatgcgtatgaaaaattcaaaaagtgccctaaaatggaggaccctttcgcaactggcgcttttcaaccagccgcaggacaatttatgaatttaacaaaaaacttcacacaaagcgggctgaaaagcaaatagagaagcttcaatcctgcactcttccttcaatattttttttcgcatggaccgtgaaatattttccgcttgcagtaaaaattagagtgggataaacaaatacatttattacatgcgaatacagcaacaaatcccagccagcttttattgtgcgtgccacgcccactcccacaggaaaaggggacacaattgccaaaggcagaggcggcgggcaaacacgtgactttaaagctcatgggattacattgaacgcagttttgtgtgggattttcgaatgcaaaaagcttaggaaattaatgcgcagaaggaaatgcatttaaattatgtgggtgactgctctgtggtaatgggaattggagtggaagtgggc

PCR verification status

Line verified as correct.

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