Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT1966 chr2L 3818514–3820578 (2064 bp) CR44077, CR44076 activityactivityactivityactivityactivityactivity
active
ventral ectoderm anlage, lateral epidermis anlage subset, ventral epidermis anlage subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8ventral ectoderm anlage4
9-10lateral epidermis anlage subset4
9-10ventral epidermis anlage subset4
9-10clypeolabrum anlage1
9-10head epidermis ventral anlage3
9-10dorsal epidermis anlage subset4
11-12head epidermis ventral primordium subset3
11-12lateral epidermis primordium subset3
11-12ventral epidermis primordium subset3
11-12clypeo-labral primordium1
13-14clypeolabrum1
15-16clypeolabrum1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264886CR44077overlapping BDGP FlyBase
FBgn0264885CR440762567bp downstream BDGP FlyBase
FBgn0031573CG34075105bp downstream BDGP FlyBase
FBgn0003430slp17161bp upstream BDGP FlyBase iFly
FBgn0021800Reph7844bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cctagcactgcgacgaattctaaaggatgcacgtggaaatatactttaaaattaaagatgaaattttgacataggagtttttccaagtgcaaggaccaattataccctgtatttactgtagcatgttcccaacttcctccttctggactcactgcattctatttctaaccattctccttgttgctcctcacatatttacccaatgataaccaaatattttcgatgcgaagacattttccaatttgaagcaatgaaaacatacaagtcgctggcggcctttgatgttgcacgttcatctgcgacttgcctcgctcgactccttgccgcatgaaatttgagtgagtcagtcaagtgctcaagtgcgtgtctgccctttcattttgaatgtgtgtgtagatgtttcgattcttttttgtaattaaccgactttcgaacacatcggcggcacctcctactttttgtttccttttccgtacgcgatgttgccacgtccacgcctaaacacttcacttgccgcatgtgtttcttgtccccaatcctggctgcactgaaagaaaactatatatatctaatggaataaggtagatgattttatggtatgcagtatgcaatacccattatattgattgatttcaactagtacttgagtcagttagccatatacttttttttccggtgtactctgcatattttccactgctgtatcggatttccccgattcaaaagacattagctcgaagttaggcaggcgcctagaaatgtcagcgaattttgaccgcctgcgcctgtttgtgttaatgagaaagtgtcatcgatttgacgtggcggcaaaagaccaaacgcattttcccatcttgtcattatgtcaaagaggtgtgatctgactcgttttttgtggccataacttggggaagttgttccgcagtgtggagatgtgagccatgaatggagctgacacactttcacgtggccacggaaggaagtcgtttaattggaagtgggaaattcgatcgggtaaatagccaagtgttaaataaattacatcttgtgtttgtcgaggaatacaaaagctagcagtgagatgataaagtaaaacgaaattttattaataatccagaaagaatacattaatcatatctttaatgtggtattctcatttctcaaggtgttattttctttttttaaaattttcaactgccattttgatcttcacacctgaattcgaggcacattccgaactgtccataaaccgatcatctcgagatccttctcaaccattggtcatcaaaaatttgccagctgttcgatcttgtttttggtcctttcatatcctgttgctgcataaatcgaacataaattcctgctccttagcagcccttgtaaaagttaattgctatgttaacacgtccaggccaaaacacaatgagccgtctgctgctcatttcaataaggctcaaaaaggaatcgatttttaagactattaaaggccgaatccgcttagcggagcgtctgcttttctgacttcttaattgtgtttctggtttactggatttggatcgtaggggttggggcggtactaacgattcctcaaacattctgcacgcgctgcgatcatttgtggtgattatatattgtttgaatttctcctttgattgcgtccacagtccacagtccgcaggatcgaggatcaaggatcgccgaggcataaatcaaggactcccgctgcggtgcattcccaatcgagggtatattttccaaaaggcgtggcccaaagtcggtcgaacagaattaaagtcaaagccaaaggccgaaaataagaaataattgagacatttgttggcagcagcggcggcggctgtttctttttggtatatttttggtctacccgcaatgacaatgtgataaaatgtacctaaaacaatgacatcaaagtcggtttccgaatttcttttatttcgtccatgggcggcagctccttgcatttttcaggtgacatcttatttccacctttcggcacgtttcgaacaatgagtgtccttttttgtcgtggtacgctactcccgct

PCR verification status

Line verified as correct.

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