Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT19835 chr2R 16474936–16477141 (2205 bp) bl, Nnf1a activityactivityactivityactivityactivityactivity
active
brain broad, ventral nerve cord broad, ubiquitous VDRC

Annotations

stageannotation termintensity
4-6ubiquitous3
7-8ubiquitous3
9-10ubiquitous3
11-12brain primordium broad3
11-12ubiquitous3
11-12ventral nerve cord primordium broad3
13-14brain broad4
13-14ventral nerve cord broad4
15-16brain broad4
15-16ventral nerve cord broad4

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0015907bl120bp upstream BDGP FlyBase
FBgn0034523Nnf1a194bp downstream BDGP FlyBase
FBgn0262334mir-9922027bp downstream BDGP FlyBase
FBgn0262227mir-9912137bp downstream BDGP FlyBase
FBgn0262211mir-24982612bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgtcaaacaaaatgaataaataccaccgaacagtatttttaagaataagtgttaaaccaccgttttcaaccatcatatatcgatagtccaggtatcgatgacagggtgatacgccattttccaattcctctctaacttttgtgcattttaactcagctctagtgtgtttgtgctatacatattttgaataatattttaccagccagtgtttagtggcggacaaaatcgtgttgaataccaattgaaagttaagtgattaagttcggtggcatcaaagtcttcgtagctgaaggaaaacaaaggcatcccgataggtgagtttttcttctacagtttttttttatcttttgcctggggaaacgcgaatgaaaagcgaatttgcgaggcaaataaaccaggctaaaagcaatgtgtgtgtgtgttgtgtggtcttgtgttttcctgaatacatttctaagaaaaagattcgccaatacatgccgattttttatagcaatatagtgtgatttttaactacacccccaaaatcgttcttttggcttcggcgcttgagttttacagtttttcttcctttcattttattacaaccaccagggcacacagaaatattcctagctctctctcgctctgccgccctgttctctctgcctctctcgcttgctcgcacgcatgccggcttttacttaaagtacagagtcgcatagttgttgtttttataattggcccatcgctttagtcgcttgttttgtttttcacatttgctgttttttcttttcttttcgtttcgttgcttccctttttcttttatctccacgcggttacaccggtgcataaatttcattataattcgctgagataaaatcaaaacaaaatagtttcgttgttccgaaagcaaaactcccacgctacaagacgagttcaacgctcgttggctttttacaaataaggaaaaggcctaacctatattttattcatagtttttagcatcaatcgatgaggtacgtagaaaacggagaggcagaggaaatggcgaagagaggctaatgagagagaaaaatacaaatggaagctaactgttgttgtttcgcttgttggttgggtgcagcttattaccacctacttgcctcccccctctcttcattgctcctcttcttttctctttgcccccctccccctcattaacccattggcatttgcagctttttaacaacagctctcttcttcttccgtctgcaaatcttctcagcaattctgcaacttttgcttttcgttctttggcgattgtgacgaatctcctttgtctctgtttagatttccagttttgcgaaaaaattcgcttttatttgccttttttggccgaggtatttttcgtttgtttctagcgtttatttcgagtgaagcaattccaaagatatttcgcggctatttgcacgcgttcgttgacattgaactgaattctcacgtaaatgtgttgagttccaaattggtcagcaaacaaattgtaaatagtattgcttaaaaatttaaatatatattatattaacaaatcaataggcatgacttgttgaaaatctcagttgtttgctcaattctttttacaaaatttctatgacaccaaatttgacttgtaagatatttcagagacacacctaaatagttcgttttgtttattctcttggtatttgttgctccatggaactaaagagtcagtcacctatactattctacccgcagatttctggcactttcaaattaacaagttaacatattaaaatcatgttcatattgtttgttagttttaacacacagtaaaaaaaagaataaattataagaataatatatgcaataattatagttaaataccatgtttaaaaaactttgcttctcataagttttttgcacataaggaaaagtatctttcagtcattacattctgcagtaaaatgtttgaaaatatggtcataatttatgctcatttttcaagcgtaattaagttggtgaataagttaacgtctttaacttctatagtttttttcctgcagttggtaaggttgcttctttaacaaatacgcaagtatacagagcgattaaaatttcgtattgcttcacaatttaaaaatagttttacacactcgaaaattattgtaatttttattactctatgttccacgatatattctttgcagctgatttatcgaggtttgca

PCR verification status

Line verified as correct.

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