Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT19838 chr2R 16480094–16482197 (2103 bp) bl, Nnf1a activityactivityactivityactivityactivityactivity
active
pharynx, amnioserosa anlage, amnioserosa VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10amnioserosa anlage1
11-12amnioserosa1
13-14head subset1
15-16pharynx4

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0015907bloverlapping BDGP FlyBase
FBgn0034523Nnf1a5352bp downstream BDGP FlyBase
FBgn0262334mir-9927185bp downstream BDGP FlyBase
FBgn0262227mir-9917295bp downstream BDGP FlyBase
FBgn0262211mir-24987770bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tggctggaaaagttcttctatcgctcgtctaaccaacacacacacacacacacacacacacactcacgcaaactgcaatcagaaggtgctgataaaaacggaagcaatcttcggtccttttcgatttttaaattgctattccgctcctgagggtttccaattgttaatggtgcggtccaagtagtgctctgtcgcaggaattaccctataattagtttgccaacccgttgggaacggctgttaatactcccagtgcttcattagttattactttggctggccccgttctttatgtggcacatgtgccgtgggttgggtaggttcatcttgaaaggactggagttttgaaattattgcaatttgcctgaataatccatgtccatgcgatgcacatgcaaagcagaagtagccttgatgcattgaaggcaccgtctaatgccacgtcatcgtgggccgcccccttaatgatatttgtccaggtcagcgcaatttgttgcatttcacaggcatttagttcgagggactggaccggaccgaaacgtatatggcgattgctctatcaatagttaaacgatttgctatcttagacaaacgggttccgcctcttattgcctcaacttcgccagccctcccactccgccgaggatccgtttatttagcccttaaaatatgcataatgtgaaaacatcagctgaagttccctagcaaaaggcatatatgtacctgcaagaaactgcagtccccttgcgccatttaaaagccctggttattagactaatgtcgaacttaaaatccaatacccagtcctcccacacacacacatgcatagaaaattactatacaatttgtgggactactatatgatatagtatgtataaataccttgcggttggaggaggaggaggaggaggacccaattttatataatgaatccatatctcacatatgtagagttccaatagaaaactgcactttccttccatgatagcaatattttgtatccgtatatagggtattcgcccccatttcgtacataggaacttatctattctatggtcagtgtagtgcttctgttatggtcagtccagtacaattatcctggttgcctagcatccggtgtccaaaagcagtaacttcccctgttttcggtattgtcacttgatttgtacgatttctattggccgacgatttccgctgtctatataccgatcctatagcttccgattggtcagcccttaggcattaaatagttggcttttccggtataaatagccccggttctggtaaatcgagttcattagttttcgtacaggactctcgggcggtgctaactgcactggctctattcatttgattggatcctcagatccatggttttatagagctatacaaaaaaaatcaagtctgtgaatgtgagaagcagatctacaagatctttgccaaaaataataatattagtgaaaccttgtgatatttttacaaacaaaaaaaggtaacttggtgacaataggcactattcatacttaaacagtgcagcaatttctcatttcaatactgattgtcacttggaaatcaatattcctggtagaattctgttcaatccaatggccaaatgctttcaattaggattgcatcaccatccaaaggcctgatcaacttcgatttgaaggtggctaccacttctttaagatcttcccactcacacttcaaataatgtactactacaccacctgtacttcaagtcgagtcaaattttgagccctcgaaaaattcatttaatctgccgaagctgctgtttgctcattgttatttcgaaaagatttttgacaacttaacagcagcttggacaattggcgttttgacatgtgaaaccacaatgaaatgaaccgacgtttgaactaatttcgactcaacgaagtgtgaatactctgcattcagactctttacttttaagaatgaccaacaaatatttcttttgatacttgatatgatacaaattgccatttccacttaaatcaataggtatttgtgcaaaagccgagatactcagttttagggaatatatagaaataaaaaaaacctcaggtccctggaaataatgagg

PCR verification status

Line verified as correct.

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