| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT19840 | chr2R 16483505–16485613 (2108 bp) | bl, Nnf1a |
      active |
anterior endoderm AISN, gap, anterior | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | anterior endoderm AISN | 4 |
| 4-6 | gap | 4 |
| 4-6 | anterior | 4 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | brain anlage subset | 1 |
| 9-10 | ventral nerve cord anlage subset | 1 |
| 11-12 | not active | 0 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 1 |
| 15-16 | not active | 0 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0015907 | bl | overlapping | BDGP FlyBase |
| FBgn0034523 | Nnf1a | 8763bp downstream | BDGP FlyBase |
| FBgn0262370 | mir-7 | 10067bp upstream | BDGP FlyBase |
| FBgn0262334 | mir-992 | 10596bp downstream | BDGP FlyBase |
| FBgn0262227 | mir-991 | 10706bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
aagcgtctgcctctgtcattgtgtgcctctctagcgaactctgtctccctctctctgttcacctctttctcaattctctcgccttgtctctggcagccgtccaattctccagctcgagtttaagctgggaaattccaaaaaaaaaaaaaaacaacaaaaaaacgtaaagaaaaccaacaccgaatccaaaaagagaaccctgtcttgtgtgtctcggtatggtccctgaaatttcccttctctactgctcactctcacttccccactatatatctctctctctctcgatcgatcgatctctatgtaggcggcggtcctggagaaacccaaatccaagtcgaaaaccaacacgcttctcactaactcgggtccttgcactcggctaacgctctttctctcatgctatctcttactttctctgtttggctaccaccgtatttcgcaaatctctgtttctctttatttatcgtttcgttactgaaagcaaaagaaacatttgaaatttgctacaattgtaggggaatttaatccatgatgcttggatgcaatatgtaatatatactaaaggcgctttatttaatcaaaacctggacaaaaattcggttttttgtataactcaataagaaaagaacatgaaaataaaacgataaatttacaccgctaattaaccttttaactaaatgaacaattttctctctctctcttctctctctctctctattcttgcgtacaccccatatgtaaccaacaaatcgactttgatttcgatttcgatttgaacaaaccaatatatatataaatatatatatatataccaaactgtcgtcggttcgcacgtccaacaaatatcttcaaccgctcatctgaatcgaatcaaattgaaccgaaccgaaccgaactttatcgatcgaatcgaacctccaactaccaaccaatcaaacgcccgcccgcccgcaccatcactctgcaccgctggtccatggtctctggtctatatgtcccacccgggtactggggtaacctcggatctatatctgtatccgtatctgaacccgaatttgaatctgaaactggcccggcccgatgtcgaaacccgaatcgaattgaaaatcgaattgcaccccctgttgccgtgcacattatgctacaaaatctggctacaaacgcctatatatatctatctatatatatatattctaatatctgtatatatacgcgtgcgaatccccatttccatgtgccatgtgggtttgtatctgtgtgggtgaccttcccccctccctatgtgaaatgcctttttatatatatatgaaaatgaaaacggcgaaacaatcaaccgatatacgattacttataccaaatcgcccgtccatcgaccaaccgcccgcctatctgattgcccgcccgcccgtccatcgaccgaaaccgaaaccgaaaccgatactgaacgttcgaacgcccgcccgcccatcaatcgcccgcccgcctgcctgaccgtacgcccgcccgcccgtgtctccaaatatgtgtgaataatgtggggcgcagtataaagccactgtgtctgtcgacgattcccaaggccccgaacggtaaaccacaaaaaaactttaaccttttaccaattactagattataatcgcatctcttcaatgcatatcctatactcgtatattgtgtggaaccccaaaagcaccgagccgagtggtactcgtgtttcgtgcttaaatatagccttagcccatctatagatctctctgtatgtcctgtatgcgctagctgtacccatttataaataagtacatgaacattgtgatgtgtccttccccacaacccgaaagcaaaaaaaaaaaaaaaagaatgtaaaacgaaaagtatatcaggcactaggtgtcccgatccgtatttgtagtagtattgcaaccaagcttgccgcaatctaactagctccgtctcttgatctcgctctccggctaatcctaatcctaatcgcatactaatccgcaaacgcacctcaagtaccccgattaactatccatcccaaaatgcacggcctatggttattttcaccgaaatcggaattaagcccagagccaagggccaatccat
PCR verification status
Line verified as correct.