Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT19895 chr2R 16581077–16583180 (2103 bp) CG13438, CR44659 activityactivityactivityactivityactivityactivity
active
brain primordium subset, ventral nerve cord primordium subset, brain broad VDRC

Annotations

stageannotation termintensity
4-6trunk mesoderm AISN broad1
7-8trunk mesoderm anlage broad1
9-10not active0
11-12brain primordium subset2
11-12ventral nerve cord primordium subset2
13-14brain broad2
13-14ventral nerve cord broad2
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0034545CG13438overlapping BDGP FlyBase
FBgn0265870CR446591078bp downstream BDGP FlyBase
FBgn0040726dpr4911bp upstream BDGP FlyBase
FBgn0041240Gr57a6663bp downstream BDGP FlyBase
FBgn0034543CG3015220078bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ggcagaccctgaaaaagtaccgccggcatagggtttaggttttagcccagctccttactttaagctaacttatttattgacttcgattagtttattaaattttaattgttccgcattccatgggcctgccatgggtgggctgccttcattaatggccgaatgacttgggaaaatcttgtattgacacatttatgatttgctgacatgcactctgggtttcgcccgaagaaaaaaaaatattttacagggaaagtggactcgccgacgagaagaaagcattcatatgtgacacacacgcagtcactgaaagaaaatggggcttacttgtttgtatctacaaattggaaatgagtatatcttatatctttagcttagcatcttaaagtgactacttttgttgtatattctcaagtatattttcatttccctcttcttttatgattaaaaatatattttttttctcggtgcaaccatttgcagcgtcacgcatatcgcggtggcagaatggttattaatacaaacagaaagccacgcatccagccgccacacccactccgcgtgcgcctcgtccttttagcccctttccatcgcctttggtccttatgtaaacattgaaatgtcattgacgtcgagggcagccgcctggccacataaatccttcttggccacaatttattaactttaacactggccaatgtcaacggtcctcccctgcccctcccccttcaacgtttgatttggatgcgaaatttatgtggataaaggacctcaaccacggacttccttcagcgaactattaactttgaatcttcttttacggcgagtaaattgtagtgtttatgttattgtctgatccttggtcctggggatgtgtctgtcattgggtaggcaggaattgcattagggtccatttattatttatgtaaatgcgtggcagttcagctctgtcagtggctgaaaaagtgactcagtgattaaagtgtggcgagtgcctggcagcaaactatttctcgaagaaaatcaaactcaaattaccatatctctggccctttaaacgagcattcagacaatctctgtacgtacatatgccatggacagtagaacatctatacggtgaactcaaatctgaaggaataactctctagttaagaaaagctatgtaaatacgcaagttttccatgtacatttttgtaatgtaaaaataagttctaagccttattattacacctaaaccttgaaatgaaaagaggaatcctttcctgtttgaaaggacgactgtatgtttgtatattcatgaacgaattattaaagcgaaatattaaagtgtggcaagtgcctggcagcaaactatttctcgaagaaaatcaaactcaaattaccatatctctggccctttaaacgaccattcggacaatctctgtgcgtacatatgctatggacagtagaacatctatatggtgaactcaaatctgaaggaataactgtctagttaagaaaagctatgtaaatacgcaagttttccatgtacattttggtaatgtaaaaataagttctaaaccttactttgaaatgaaaataagaatcctttcctgtttgaaaggacgactgtatgtttgtatattcatgaacgaatcagcagcaaactacaattattgtgcactttagtatcgcagtgaaaggctgagcctaatgaccgaggccgtgaccccagaagggcagttgctcccctcgaatcccccggctgaaaatgcgtactaaatgcgctaaattactaactaaatgccgcaagtgccgcccctgggcatggctagaatttcacaaatgaacgccctttttgggtgggcagggggttgggttaaatggccagaggggtgcttttccactgttttcttttttctttttgggttgcttataccaaagccgaaaaactaaagtcaaaaggaatgggaaagcgaaagccaaacactgccgacagtcgatgacatttgagcgataagagaaactgttgtgtggcttacttgctggcaaccctagtgattttctataccatgtaatggttagttggttgttgggggggtcagaggtcgagagcgttccttgtggt

PCR verification status

Line verified as correct.

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