| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT23556 | chr3L 547671–549793 (2122 bp) | hipk, Cypl |
      active |
trunk epidermis broad, head epidermis subset, yolk | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | yolk | 3 |
| 9-10 | amnioserosa anlage | 3 |
| 11-12 | not active | 0 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 3 |
| 13-14 | dorsal epidermis subset | 3 |
| 13-14 | posterior spiracle | 3 |
| 15-16 | trunk epidermis broad | 4 |
| 15-16 | head epidermis subset | 4 |
| 15-16 | posterior spiracle | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0035142 | hipk | overlapping | BDGP FlyBase iFly |
| FBgn0035141 | Cypl | 4741bp downstream | BDGP FlyBase |
| FBgn0035140 | CG17180 | 5525bp downstream | BDGP FlyBase |
| FBgn0001316 | klar | 7058bp downstream | BDGP FlyBase iFly |
| FBgn0085298 | CG34269 | 18676bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
aagtttgtaagcggccggaaaaaggcgaacggaacccaaaaaccccaatgcaagccaactgagtgcaagggagacagccgaccacgtcgagcgggatagcatgcgccaatgaaaacgtcctaccccccaaaagcgtccgatttcgttgactacgccgttgccgggggcgggggatccggattctgttcgggattaggagcgggactttcagtcagggcgacgtccttctacggcgatcaaacggtaacggcaactacggacgggacgcgtcaccaggaacaacaacaacaacaactgcagcagcagcaacagcagcatatcctaaggcaacctgcaacatccgcatcgacttcatcggtagctgcagcagcaaccagcaagcgaaaacgtcaaacaggtgagttttttattagccatccaaatagttactacagacgtgcactagctttatttgtgactaggctttcgaaatccccacctataggtgtcaaaaggtttgaattcgatgtcgataacatgtgaattcgatatattatgttatgcaggcagttttcagtgtaaatcggattcggataaatataagttatcggataagtttttgcttagctaagcaccttcagcaaccacacgaatgaatcatgggtaatatgtccggttgattgccccttcccgtggtgatagcactcatcgattattgtgacaatcgcttaatttgcttgagttatcgttatcacacacgcgccgtgggcaaatgcgccctgttgtttagtaatactaggcgcaatatttattattattggttgccgtgccatatttctgcctcttctgggcactcttatcgcccgatttcccccagcgcctcccctttttattgttgattatcacaatagacgccatggcaacttttttcttctttatttttggtttggttggtgagagtgcaaggaagcgataattcgcatggtggtttgtcgccgttttgtattttttgggtttgtggacattcttagactttgttttgtacttcggttggtatctttggattttccacgctatccgcgattacgcttgcatgctcgagcatgtctgtcttggcgcttgaagaagattcccttccataatccctttaaaatttgcgatgatgttttcgctgctcgacttgcctggcttcattcacattatctgctctgtgaatagtatgagttattgtttgatatctcacaaggtcccccgcacccctgttccccgagctcattgaaaattccagcggacgcaattaccaccccaattgtctcccaatctaagttttcgcttttgagcggctccgcctctttgctcgactgtattttcagtgtttccttcgctttatttatttttcgcttattgcgacttataaaaatatttcagttgttgtttgcgctccccattcgccagtttgccagttcgcttgttgtcgtcatcagagtggctggaatttgttgtattattttctttttcggtaatttttccaccatattttctgctgttctcttctgcgaaatgtttatcttgttttgtttggctggcccctaatcgagataatacttttatttttattattttttttttatacgagaatacgattcttttatttctgggtttgctccgaatatctcgaaaatgtacggggtacgggtatagccaaaaatattagtttttgcgatatgaacatgttgattttgtgtgtggcacttgattttctggctgtcatcggttagatatttgtttatttccacactcttatcgtttgttatgaatttctgacaaaaaaaagtttttggggataattgtttcagctaattctgatacctcaaagcatataaagtttatacgccttgcctatcaagtaggtgaaaatgtccgtagatttcagttcagctttcttctcgtgtcttttcattctgccctaattaacttctcgctcagcattctcgacttcatctgcggtttttcacatacatacacatttctggtttttttctctgcctgtcgatcagcggcatcaaaaagtttccgcttactttgttgccttttcattactgatagccagctgcacgtatactttcgcccataaatctccgccg
PCR verification status
Line was not verified.