| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT23564 | chr3L 561070–563286 (2216 bp) | hipk, Cypl |
      active |
pharynx, head mesoderm anlage, posterior midgut primordium | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | head mesoderm anlage | 1 |
| 11-12 | posterior midgut primordium | 1 |
| 13-14 | brain subset | 1 |
| 13-14 | midgut subset | 1 |
| 15-16 | pharynx | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0035142 | hipk | overlapping | BDGP FlyBase iFly |
| FBgn0035141 | Cypl | 18140bp downstream | BDGP FlyBase |
| FBgn0035140 | CG17180 | 18924bp downstream | BDGP FlyBase |
| FBgn0035143 | Ppm1 | 20267bp upstream | BDGP FlyBase |
| FBgn0001316 | klar | 20457bp downstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
gctgttgttgcctccgactgtagactgactgtatgtagtatcgttgttccagttctcccgatgatgatcattatgatgaagacttgttagacttgacgcacggccgaaagagagggaaaacgttgggcgaaagagacggacggcggcctgcctggttagctgatgctatttttatttggttgctgttgtttttgcagttcttgtcgcgtctcacccctccatagaatctggcacggacttctgcgccctcttcaccctctccaccgcaacccatatcactccactttccagtgcacccgcgtttgaccccaattgaagttaactccgcttggctgggcgctactcaaagtgtctgttacgaaaataccctgcaatgtggagtgcatgttcttatcggtatataatcaattcacagagttcatccacttttaaatctatatttatcatttaagagatccatcataattgaaaccaaaattatgttagattagataatctagatgtttaatgcgctggcacatgtatggcacaattgaatatgaataatattcaaataatattttgtattcttttggttcgtgttcaaaacattcttaaattattgattcttaaatttttttgacggttcaaattaatggcgaccatacattggcaaattagttttattctttttgaacctgtcaatggtctctgtgccgcacagtcatggctatttcttctcgattctttttgtgccaaagttgttttccaagtgaaaaacccacccactgcctgcccacttgtaccagcacacctgaagagttatgcggccacgcccacttccgtcggctgtcctctcacgcccctgcgccctcttctcgtcgcattgtgcaacactcttgcgtctctctctgcgattctcagtcgggttactttaggtcattgcagctggcgttacgcttctaatgctcgcttgaaggacgtcgagtcgacgtcgactgcaactgcgagagttatgtgccccgatgtttatacttttgtttgtagttgtcattctatagccagactaaaaaaaaaaaaatccaagcgacctttaagcggtcgtcaacattttgtttacttcaacacaaagtcgtttcgctagtctagccacatggaaaaacgcaaacaaaactgagaaaaaattttgaattcctaattacaatgggttctatcagataaacaagtacgcgaggaatgcgggaacttagggtgataagagccgcttgtgggaaatgttttcaggggttagatgaaagaacttgataaaagattgcatacagttggcttatgccttctaagaagctctttacaattttcacaaagactttttagggttatattatttatattttcataaactgaaaagcaaacaatcgtttcggggctatcgaatgccaataatctacaagtatacaaacctatattagtttaaaattcaaatgttttgtgtttcggcagtagtctggcaattttagtttcgaaaccattcagatataataatgattctgcaattctttcattacatagcctcccattcatcgtccaatttcaagtttctgtgcaatttgccaatttcaattcggttcatttcgaatggttgatcttaatctgcgaagagcaaaactttcacccgatgaaaagtggacggcgaacaaatttccctttaattttgtattattttgttggtttgtttcggttttgtgtcgggtattttcggtttcttttgccatgaattacgtttaatttgaaatgattttgttgctattgccgctgtcgacttgtcaactgcatgcaacatttaaccgaaaagcagcaaaaagcaatcgaaaaagcgatcaaaaagtggatcgttacgaggcgggtttttgagtgggtggcagaagaagggggtgggatagtgggtggaggtggaggtaaacgccacccgccatcgtatctgttgctcagtcagcatccacaagctttcgcggagcaaaagaaatccacttgcgatccacaagcaatgtgtgggcaaagcgttctacactcgcggccaagagaatagtatcgagacaaaaacatgaagaaaactaaaaaaaaacctatcgaggccattagttttttcgttttaccagacctttaatatgtacagcacaacaatttttttcaagaaatgtttaattcatacattatctacgccactgcatttgtggatcg
PCR verification status
Line verified as correct.