| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT23788 | chr3L 1001774–1004018 (2244 bp) | trio, CG12038 |
      active |
amnioserosa anlage, head subset, amnioserosa | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | amnioserosa anlage | 3 |
| 9-10 | amnioserosa anlage | 2 |
| 11-12 | head subset | 2 |
| 13-14 | head subset | 2 |
| 13-14 | amnioserosa | 2 |
| 13-14 | head epidermis dorsal subset | 2 |
| 13-14 | midgut interstitial cell | 2 |
| 15-16 | amnioserosa | 2 |
| 15-16 | midgut interstitial cell | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0024277 | trio | overlapping | BDGP FlyBase iFly |
| FBgn0035179 | CG12038 | 6072bp downstream | BDGP FlyBase |
| FBgn0264574 | Glut1 | 8088bp downstream | BDGP FlyBase |
| FBgn0035181 | CG9205 | 32923bp upstream | BDGP FlyBase |
| FBgn0004870 | bab1 | 34595bp upstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
ttcggattccctctactaaaccctttcataataatcacatataaaatcattgatcgaatgcttttctgtgtaccgaattcagctaataagccatcatcatcaacagcaaaatagaaaaacactcggaacagagcagaacagaaaagaatagttcagagcagaacagaccagacgacattcaatttattgacggacaaagtggctatagcgaaggcgacgttctggcgacggacacatcgggatggaaaacgcccgaaatcgaggcgagccatccgaaatggggagcttgccgaacgaaacgaatcattaatcaaattgaaggagagtcaaaccttaaaaccgatgaagtgcacacaaagtgcgataaaaactttggaaatttcaaaactgtcaattaaccgaagaggcaattttgaaaatttaaaatgataagtgctgttgaatctagcagatttgtacatttttgagggagtattcaaaaaaccaaacaaaagaacatgcaaagaagatgtcgcatttataaaactataatccacagatggctggtagttaattttgttaaataaaatatcatagggaagaaagaaacctatgcaaatgcttttaattaattatatggcttttgttgaagcattaacaataggtacgacgaactagagtcaaattctccatcatgtggtcagcatcgcacaaatatatagaatgcatcgagttctgcataattgaaggccacattcgcaaccatgaatcaggcagcccgcttcgctgactgtatcccttccctgtaatttgctagcagaagtaccagccaagtggaagtcccgcccccacgcacattcaaccgaaaaagtctgtgggctaatttgactatcgaaatttatgcgtcgtatctgcgagttcgagtatcgctgcctcttcgtatctgtatctgtatctgtacgctgtgctgcggtggtctattcactctcctgactcgagtgtaaacaaaataaagtggcgcatttatggcgaaggtggctggcccggagaacgtacagaacctggcgcacggaggaggattcccagtccccggagaatgtgtgcgcgcctccccgttctctaattgagcaaaaaccgtgctcggattgccgatgacgtcgatggagcagaggcgaacgggccaaagtcacaataaaccgctttgatttgtgtgggaaacacatattagaggagctgcgtgctaagcaaacaaacttggagccaacgaatgggtggctgattggacgggcgcactggggatatcattcacgttagggtgggtcaatgtctgagaagtacttttgcaaaaatgctctccgttcattacagtgcaacatgtcgtaagttgtttcttcgaatgagaacagtacaggtaacttatacgagtaatagactttctagattggttgtacttgttgtgcataaacaaatctggtttagaatgggttacacatagatcaacttcaatttacaaccacacttcttgctaaaacgtatccttgccatacgtggtatgtacagtaagctatgacttcctaactactgcagcccacccatatcctgtgggaaatcttgggaaatccgtgtcggacgcaggcactcaccatgttgcccgagctctccttggcgtccttggcaaaggcgggcggtccgttggcaatcaggtgcggctcttggatgggtttcatgggcggcggcagctcgaggccgacctcctcgtccggctcatagtcgccggctcctgctcctcctggatgctgagttgagctggggaattgcgacgatggcagcacggtggcgggactggcacctggctgctggttttgctgctcggccagctcctcggcgtgcttctggggtgtctagatatagaaaggaaaggcgtggagaaacgtcaaatgatataaataaacgctcgttaaacggtagcactcactctcaggtttttctccgagggcttcttcaccagcggtttgctacttggcggcttgtccgttcccttgcgattcatcagcggcagccagttgcgtctgcaatgatacgaaatacagaacgattcgacaggtaagtggcagtttgtagacttgaagaactttagttcttccagggagacagcctacaggaacttgcgaatcgttgtggtggtttgcacaagttcgtccatctctcatggcgtgccgaataaaatcgaaataaataaaacaatgagatgcttgatggctgtcca
PCR verification status
Line verified as correct.