| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT24021 | chr3L 1454694–1456812 (2118 bp) | Ptp61F, CR44842 |
      active |
mesectoderm anlage, ventral midline, brain primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | trunk mesoderm AISN subset | 2 |
| 7-8 | mesectoderm anlage | 3 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | mesectoderm anlage | 4 |
| 11-12 | ventral midline | 4 |
| 11-12 | brain primordium subset | 4 |
| 11-12 | ventral epidermis primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 4 |
| 13-14 | ventral midline | 3 |
| 13-14 | brain subset | 3 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003138 | Ptp61F | overlapping | BDGP FlyBase |
| FBgn0266116 | CR44842 | 6009bp upstream | BDGP FlyBase |
| FBgn0004635 | rho | 9117bp upstream | BDGP FlyBase iFly |
| FBgn0052319 | CG32319 | 16156bp upstream | BDGP FlyBase |
| FBgn0043865 | SA-2 | 16823bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tcagaggacagaaggccgttgaacatgtggcattaaatgccaattaaatggccaaattgaagcggcgcaaatagctaattgatatatatgcatccgtgtatccgtgtttcaattcgcagttggggattacggagacactaatcgcgccattatgacggacggactgatggttgttatgacagcagcaggatataattggtggccaattgaagggtattcgtgtgtgggcagcagtactggttgggaattataagctgctaatgagacactgatgtggcaggctaattataattattgatgggttattcatttgatagttggtgcaacatgaagctcagaaagctccatttggcttgtaatcagatattacatttaaattaagaacccatctcctatgatggttgtataaatggacaatccatttcctaatggcatctaattagtctgggctccagcaggagctcttcctggcaagcgtgtgtcgggcacgcgttataggatcgccatatggccgcagcgcgggtcagttgctgaccagcagcggtaccaacaaaagacggcacacaaaacaggacctcaatcaaggtcaggatcagggagcaacagcaacagccaaaggagctgcagccgtcataacagcgtcaaaactaattttcattcccgaaaacaaaacaaggagctaaggatcgaggaatcgagcgacagcatctgttgccgcaaccaaattaaatttacaaattattgaagaaacacttttcattttcggaaaagtgaaaactgccgctctggccgggcaactcagccaactgttgtcgccggttcaaatctgacagcatcatcattaggaagggagctagctccctgcaatatccttgaaggactgactgacaaccgacacgagtccctcgctcaggtggcaacgcagccgtgcatcgtgataagcaggactccttggggcgtccttacagtactttccctatccgcatccatacactttcctctgctccttcgagtgccacgtgtcagctgtggaccgcaaagactagaccaaaccaaaccaaaccagggtctctctaccatatggcttgggttcgagatcctttccgaacggaacatgtgacaagactcatttgattccataatttgcaataaacacgaatgtttatggtacgaaaacggcgactcattcgaaatgcagccaagtggccggggatgaacgtcagctggaggagtgatcatcgcgcctttcagatcgcaaacaagaacaagagttccatattcagaactggaaacaaaagatctttcgttttgattcttttatagagcataagttttagcatccttgaatgcttcataattaggggatattaaagtctctgaatcgctgacttcgacgcagctgttgaatgcagaactgcaagcttgagagaatcaaccaccatatacatatctctaaaaagattttgatttaagattctttaactgtttctagcatttcatttttatcatctgcgtgtgagttcctcgctcagattttccacttacagccgatcatcgccacaggacattagccgtgtacgtgtagagggctacaaaggtgcaaaggcaatgccgcaatccccggaatcctcggaatccccgaatgcataaacgtgcccattgccaggcatcgctaattccctggccattgaagggagcaggaactggaataggaggaagcaaccgaattgaatgcgaataaatgctcacttccatttccattacgttgccatttccataaacgtgaccgccagaaatgtgtgtcatggtcaggccatgacaaattgcagggcgcgtgagcaggagaatggcagccggcctgtggagatttaccgactggtactgtcctctgctccgtgttcgtcgcctgatccccgattgcgaaaaagggaaaacacaatgacacagcgtgaggcctcagattttccgctttttgttttgttttttttttattttccagggggttaccggctttcgggattggaggcataaaccgatcgtgtaattattacgcaaaatagagtttccacaatcggaaaaatggattagagcagcgctgggattttccaatatcaaacag
PCR verification status
Line verified as correct.