Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT24026 chr3L 1463758–1465534 (1776 bp) Ptp61F, rho activityactivityactivityactivityactivityactivity
active
pharynx, posterior spiracle, midgut broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14posterior spiracle2
15-16pharynx4
15-16midgut broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0003138Ptp61Foverlapping BDGP FlyBase
FBgn0004635rho53bp upstream BDGP FlyBase iFly
FBgn0266116CR44842958bp downstream BDGP FlyBase
FBgn0052319CG323197092bp upstream BDGP FlyBase
FBgn0020248stet11680bp upstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

tcttatactgcaccgcacagcgagcacttataaaggccggctgccttgcctttcgaaagtcagttgcgtgcgagccgcgagcgcgagatcatcaaactgagaaagtcggactgcgactcgaaactgaaattgaaactgaaagaaagaaatattcaaattgtcgtgtgtgtgggtgcaagcagagaatatatatctcaagaatatctgaatacaagctcctggatttacgagcagcaaaactaagttaccaatgtgcgagccgaaaaaagcgagtgaaaaacgtgcgaatatgccagctaactaaagacatttggattacaagaaacccacgcattttggattataaacattgcgacaggcagaaaaacctaaggtaagcccccgaccctaatgagaaaatgcgcgagagctaaaagatacaagatacaaaatatgagttgcgagatacaagctacaagccacaagggatatgcaagaaatgtgcaaattgcaatagaaattgtcacagcggcaaaacaaaagcatttcaacttagaggcgtaatgagtttgttcaacctgtgtgcccgctcgctctatctctctcgctcgcaccctttgcccgtttttttttttaggggtgcgagtgcagcagaaagcataaaaaatgcaaattacaccgcgggccatgtgaaactatgtttctgaccaaacagacaaaaaaaaaaaatgagaagaaagaaatgatgaaaagaaggccgaatgaattaattcattatgtcttaaagcccgctttcgacatctcttcttcatgctcgcatggacattcggtgcagtctgcaattaaagttaataaataaattaattaataagcggccgactgcgatttcgtgccttattgaaattgctaggcaaccgaaatgaagaacatgaaaagagcgccagccaaggcacggcacccactcactttttcgagcagtgtaggtagcagacacaaaagcaacaacggtgcgtgtgtgcaatgcgacttgaggcgaaagagagagagggggcatatgcgaacacaatgagtgtgagtgggagaaacgcgtttttttaagtttattttttttttttttgttgagcaaggcaatgaatttgttattttttttccttgttgcgacgaacagttgtttggggaatttaagaagatttgtgctgtgactgtaattgaatcgaatgcgattaacataatttgtgaggaaatgtctctgggcaatgaattacaataatgcctggccattagctgattagttggccattagcgaagatgatttcagggctgaaagtgcagtttatgtaacggcgtagatgctacacaagctacatcttcaattttgtccagctaatttcgggccacaaaagcaaacttggcccatcaaattttatggttagctcacacaagctgacccagttttcccttcggggaaaagcagccaggaagttgcaggcatcggaatccgtgtcccaggccataaacaaaattcttacccacaaagaagcaggcttttccttcgcttttcttttatttctgctgcatttccccacacactctggtttttctgaagtgttgtaattgctcttgttttgtgctgcgttttatgaataacttatgcacttaattgatttttgtttattgttcggttcaagttaattaattacacactttatgcgctcctctctttctccagaatttcttcaacggcgccagcatggagaacttaacgcagaatgtaaacgaaaccaaggtggatttgggc

PCR verification status

Line verified as correct.

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