| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT24619 | chr3L 2700254–2702439 (2185 bp) | Fife, Mrtf |
      active |
ventral ectoderm anlage, head epidermis lateral anlage, head subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | ventral ectoderm AISN | 3 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | head epidermis lateral anlage | 4 |
| 7-8 | anterior endoderm anlage | 3 |
| 9-10 | ventral ectoderm anlage | 3 |
| 9-10 | head subset | 4 |
| 9-10 | head epidermis lateral anlage | 3 |
| 9-10 | anterior endoderm anlage | 3 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 11-12 | head subset | 4 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | head epidermis lateral primordium subset | 4 |
| 11-12 | peripheral nervous system | 3 |
| 13-14 | brain subset | 3 |
| 13-14 | peripheral nervous system | 3 |
| 13-14 | head epidermis lateral subset | 3 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0264606 | Fife | overlapping | BDGP FlyBase |
| FBgn0052296 | Mrtf | 17361bp upstream | BDGP FlyBase iFly |
| FBgn0053234 | CG33234 | 36633bp downstream | BDGP FlyBase |
| FBgn0053233 | CG33233 | 38754bp downstream | BDGP FlyBase |
| FBgn0020509 | Acp62F | 39496bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gcactggtcgagcaaacaaatgctgccaattagcaaggacatttttcaaatgttactgtaaaagaaagaaaatttctgtacaacagaagaccaaggaagtggaaaatatttttagttttcctatggctgcaaattaataaattcccagaaattggtttgggtagcagtagctcagcccagtttttatccaatcatcagttattagcagccactctttccgagcaggaaaagctcaaagtggaaacgaaaaaagaaaaccattcacttgtggagcgacattcacttttttaggcgacgttttagccatgcgagcacaagaaaggcagacaaaaaacacttgattcatgggccgcacttttttctacggtccaccactgacttgtaggcaacattcaacgaggcgtggatcctttcgcaatcgagtcccttttgagggcgtttgtgggtgaaaggcgagctgtatgtgcaagtggatgtgtgtgtgtgtgtgtgtgtgtgtgtggatgtggatgctgtgcgttgacggcaagtttcacaaatgatttcacatttttgcataaataaatgtcaagtgtgcgccggagcatgcggagagttgctgacagttttctaataaacccgaagggagaaagaaaacaggataatcagcgcgcacgacagggataaagaggccggagcaacaagttgtgcacactatatgctatatggcatatccccatatcccatatccttgtgtgtgtccactttagcctagcaataatgataaccttggctgccatgatgcctgccatttttcaaggcccttttccccacatgaaaacgaccattttcattccactcgacactcgacgttctggtttggtgctatggttattttaggatttcccagcaacgctgccaattttaataatgtttactcaagacgtagtcgtcctagatcatattgcctccgcctcctgcctcacctcgaaataaataataatggagaggcaaggaaagtagccagaatgcagtgaggcatgccaaatgacagctgctccaaccagcaccactcaagttgtaatggaaaatgccagtaccttaataagcagcccataggatgcagcacgctattgcagcggagaactgacaatgctgctacgtgtttttccgtgcctgtctcggtgtggagacacccattggcattcctgccattcctgcacccattagacccctaatttatattccgcccatccgaaaggggtgcgtccagagtcgcattatccctctgccagcagccggcagaaggcatttatataaatatcattttaagctgccacttgctgcagctgctgcctaatgagcggatttaagtgccccaatagaggttctcggcacttccggttctgggaaacgtttttccgcactccagttggttgcggtaaaagccagggctgcaactcacagtatcgcataatcgtcaactagtggaatttattttaaaggggagtcttctgggaaatcgagacgttctcggcaatcatgatatcgaaattgaatagtccttgagtgaggattttaggacaggcacatcaatagagacgagagtttttggcaatcaaatttcaaaatctaatattctttgatgatttttgccatgtaaatcagcgcacaatgcgtgtccttacttcagaaattccaattcagatttaagaaaaatgagctcagattgaaataaaagcagatatacagaatattttctataccttgcacatatttaaaatgcttgcgcaggtcaaatatatttttacaaaatatctaaccagaaaaagtgatttttattcagtaagaaaatacttctatttaattctttttttttaggttttccttacaaaaattcctcacagttcgcataagcaattcggttttgtgccctttccgttttcaatttctctccttatttataataaaaaggaaaaggctttgatttgcatgcgggagtctttgagctgcctttgtgtgccataagattttcgcccaaagacacaaaaaaaacatattgccttcatgcgtttatattggaaaatattgatttacctgccatcaaagacagctgcgacctgctacgactcgagcgaactagtatttgtgtttgcacttggtgcgagccacaatgccaggaccttagatccccgctgccaggatac
PCR verification status
Line was not verified.