| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT24637 | chr3L 2735988–2738074 (2086 bp) | Mrtf, Acp62F |
      active |
pair rule, ventral ectoderm anlage, A-P stripes | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 3 |
| 4-6 | pair rule | 4 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | A-P stripes | 4 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 4 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 1 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0052296 | Mrtf | overlapping | BDGP FlyBase iFly |
| FBgn0020509 | Acp62F | 3762bp upstream | BDGP FlyBase |
| FBgn0264606 | Fife | 24299bp downstream | BDGP FlyBase |
| FBgn0035370 | CG1240 | 31011bp upstream | BDGP FlyBase |
| FBgn0035371 | CG9977 | 32478bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gggtatccgccttccgagaaacaactcgtataaatagacccaaaacgaccgtgtttttcgtaagggtgtggccgtctgtgtgggtagtgtcctcaattaaaattaattatgcccaaacgatacgctcaataaaatttaatttgcgaaaatatgagccaagaaaatgagccacataggaaaatgtgacatttaagtgccgggggccagcatcctcaaactattcgccaaacaacaaacacacacagtcgggtctaataattgaaattgaattttcaatgatagcaaggcgagggcccagcgatattttagatttatttagatatgtgtatccacccccatgagccgaaatgtttggcacactatttagaagcaataggacttgggttttattttcccgagatttcacctcaccctggatgactagctaagctctaggaacacctcacctacatacgaaatggttcagatttaactggacctggcatcgtcacccagaaaagcagtcagtctccagatccccccaagtggaataaagactagacacttgaccggattctcgttctgcattaaattttgtgcgagtaagctgacgactctctattctgttttatcaaaaccaaacgaaatcgcattaaaaataaataaaattaaaagtgtaaactgcacaaacacacacgacttttggccatgctgcgtgccaagtggaaaatatttcgcaagtttttctacacattattgtgtgaaaaatactatatacatatagtgtactatatatatacacatctgtgtaaaaagtcggacacaggcaggcaggcggctgcctgtgtgttatgtttagtttgctacgttcaatttgcattgttgttgcctgctattctattgttgccggcaaaacaaaataaggcaacgcaaaatgctagaatgggcgaaaaaaaaaacaaggcataataagcaggcaagaataaaaactacaaaaagaaagcaaaaaaaaaaaaaaaaaaaacgaagcataaaggagatgaaaatgaacattttttggcaaacaattcagggctaaatattttcattgttttgttgagtttttatcacaacaccataagtttgtatccaagtggcaacaggaaaaatctagataaaatcatcaagattctagcaatttaaagtcccgcattatttgtgtgcgaatcatacgatatttttgttttcttcctgtttgtagttaatttaaaggaaatcccaaggatttgcatctctaagttattgggtaaacattacgaaatatacaaataatgtgattatagtttaaacatatttattaataagatgcacaaggtgacactctttgtgtttcttagtatgggatcttttaaatttagtaaaaggagttaaagtaacaaaacaaagcaaaggcatttaaaatgtcaagataaatcccatttgacgcttatccttgggactttgcaaagttaatggataaatatcgagtgccatgataaagtttggttagttcaaagggttttggggtttggggtttgagttttggaacccgcacaatcgcacgcacacatttaattgcagaaatgcttaattatgcatgaaacactgaaataagcaagacgcacacacacatacactcactcacatccagcgagggatgaataattcatggcaaaacggagaattcgtggatcggctttgcccttcccttcccttccccttcgattaaacagcgcgcgttggtaaaacaaacaaataaacagcatagccagcaatattttgtacctcctaatgacgtactctttccagacggcaaaaaaaaaaaaagaaaggaacacgaaaattgagaaaacttttgccgtgcaatttgcacgtcaacattttcccaaaacaccgaaaaaagtaatactaatggcaggcacaacaatattttcggcagcgtcggcggtcaagtttgtgttgtgatgttgcatggatgcctccagtggccatacccttcccccaaatcggcgaaaccaaggacattcaatatgggaacgaggtgagaaacgattagacaaggcctcgttagctggagattacagtgaaca
PCR verification status
Line verified as correct.