Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT25279 chr3L 3976617–3978758 (2141 bp) CG43915, scrt activityactivityactivityactivityactivityactivity
active
brain anlage broad, ventral nerve cord anlage broad, brain primordium broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10brain anlage broad4
9-10ventral nerve cord anlage broad4
11-12brain primordium broad4
11-12ventral nerve cord primordium broad4
13-14brain broad4
13-14ventral nerve cord broad3
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264516CG439152834bp downstream BDGP FlyBase
FBgn0004880scrt7279bp upstream BDGP FlyBase iFly
FBgn0035481CG1260511847bp downstream BDGP FlyBase
FBgn0035480CG1498424068bp downstream BDGP FlyBase
FBgn0035482CG1498526857bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ccatcagcaacaagctgcaaggaccaaaacgccagctgctgcaaatggcacgcatgaaaatgaaaggcccatcgaatgggcgcgttcattgagaatttatttcaataagagaaaagaggaaaaatgagagggtgaacatatatagagtgggtagtgcggggaatactcgtacaaggtacatatcctgaggggcagcactaaaggccatcggaaactataatcacgtatgtgcatatgtctcgggcaacacgagtctgccaggatatcagcgctaagtgctcttgttgcatgctgcacaagtaattaagattagtgactcaatatgcacacaaacacaggcgcacaaccacacaggcacttgtatgtgtttgtctgaagacaggattcgttagacaaacaacttaacttgttctatgccatcctgtacgctttgttttagctgcactctgcaaaaatttagcaggatgttcatgacatcctcttagcttaaagcaacttaaatatagaaatgagggaataatagctcaggatcttggaactctgatgaaatttgcaggaatttcttggtctacttttggccaagaatgtttaagaaatgcttaaaaatgtgaagtaaataaattaataatgcagctgcctctagtttatttggtatcagagttgaaagcgctctagtcaagctgagtgtagaccactttaagctttaatttctatttctaccttcaactaatgtgcatccttcgcttggctcctcttgcacttggaattaccaatttacacagcacagatttgccgaaagcagcttcctttgtgcgaagagtgttggctcggtaattcccacaaattgaagaatcaactcggttgcctgattgatgcctaaccctccgtagttttgacttctccgggtttctaattgaatcaactgctgcaaagggagaatgcagcctcagcctcagatattcaaagtatttccgaagcggctgcatcctgaaagccattagtttatggatggcaaacaaaacaaatgccagagggcgctaacctgagctcgatcccagtcccaatcccattccccttccccttccccttccccttccctaaacgagttcttgtcccagtcccgaaatgaaattcaagatctgggtgcagcgccagaaaccagaacctagaacctggaaccttggccatagatgaacctcaaccgaaagcggggtcaggaatcaggaatcagctgctgttgcatccatgcaaaggaaaatggaaaatgaaataatgccaatgtggacagctgtcggaaaattgttgaaaggcgactgaaaagcggtcttcgctctgctctccgtatggggttcagtttgcccttgggctgttttttatgcaggggtttttcgtcctggcatcagcaaatcatcattatcatgccaaatgcagtttttagcactgagaaaaaaatgagtatttacaattaacccttcgaaactcttagaaaatgtatgtgattattttaaagcaaatcacttcagaaattttacctttataaaaatgtatagataatttcttatattggttccttggttcgtagatggtaattgagtgcatcgcttttaccattaattgaaatattgattttgttcagtgtgtgtttatgtagatcatcgactgatgccccgtctgcagatcgctgggcgagtccttgtccctttcatttcaatctgcctgcctttcgctacctggaccgcacctcaacttttgggccagggttcgtgcccttccctccactgccacttcccccaccctcgatttcatcgctcatgaggagaggtctttgaactctgggacgcgtctaacgatttgtgggtttcattcgctttgttgtccgactgcaacagctgccaattttagtggaagaaatgggagagaatccctatccctataacgatcccagtgagatttgcccctactactcgcaatccctatccctatctcaacacacgattcgtacgaaagtccgaaacaaatgtaattaaaaatacaaagtttcgaattaccggaatggtaactggattctgaaatgaactggacacacgcgcgcgtccagttttggggaagccccgcaagtgtccgccatatccttcgtatcct

PCR verification status

Line verified as correct.

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