| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT25526 | chr3L 4430065–4432281 (2216 bp) | nAChRbeta1, CG15020 |
      active |
ventral nerve cord broad, brain broad, ventral nerve cord primordium broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 1 |
| 7-8 | procephalic ectoderm anlage | 1 |
| 9-10 | hypopharynx anlage | 1 |
| 11-12 | brain primordium broad | 2 |
| 11-12 | ventral nerve cord primordium broad | 3 |
| 13-14 | lateral epidermis subset | 1 |
| 13-14 | brain broad | 3 |
| 13-14 | ventral nerve cord broad | 4 |
| 15-16 | brain broad | 4 |
| 15-16 | ventral nerve cord broad | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0000038 | nAChRbeta1 | overlapping | BDGP FlyBase |
| FBgn0035543 | CG15020 | 3445bp downstream | BDGP FlyBase |
| FBgn0035544 | CG15021 | 6656bp upstream | BDGP FlyBase |
| FBgn0035542 | DOR | 9418bp downstream | BDGP FlyBase iFly |
| FBgn0035545 | CG12607 | 16508bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ccacacaactcccaaaagaacagcaacaactaccaaatgtactggatttagtagctatatagcaaatagaccagcaacaacaaccgccacacaaatctcgacttgcgattgcccgaaaaaatgagtcttggagaatctgtcaaagcgtcgctgctgcagcgctgcaaaaaaaaaaaaaaaaaaaaagaaccgaaaattataaccgaatcacaactgcgctagtcatcaaaactctttgtaaactttatatatatatatatatataatttggaatctcaagtagaactcctcatagcacacctcgcactctgttaagtgccgccccacagattagatattttggcatagctataacttctatctctatatagattcactaaacattagcttagctttagctatctctctctctctctctcttgctctctctttctctcccgctctccgactctatatccattgctcgacaactgtaaacttctgtacccgaaccgaactatcaaactatacgcccagtacacctgcatacttgttttactctatgaatattttacaaacaatatataatattccccagctataatcgcttttgtaattattaacatttctccagagtcccctctgcatttctctcgctcgctctctctctatgactctctatctctctgtctttgtccaccccccaaaataaatattaaaaacccctgactgtgtatctacgaaaagcgtggtagccaaggtccttgagggacccgcaggatgggtggtggcacattacatcccgaacgaccacggcaaccgaaatgaacagcaaccaaaagaaacagaaaatgcaatacgaaaatgcaacgaaccgaaacaacaatgcatatatatatatacgtgtatataaagatttctgtatcaactgccgaatcttaattcatactccttctcttctgagcagtccaagaagtaacgaaaagaaaagcaaatagaaattgtagtcgaagttcgcatagacagaaccccccattcaggattagacttaatttgctaaagaagaactaaatatattagtgcattcactcacccgcataacaacatacacacacacacactgatttgcttagtatatcatcatcatatgtacccaccccaaaaaatcataacgttcacctagcgcaaagtgcaactccaaaaacgagtttcgaaagtcacgcacgcatacagtagcagcagttcgtgctccatatatgagaccacacacacacacacatggacacacaaagggacgcgaacacacactcaaagaacaaggataacccggtcacacacacaagcggccgagagtgtgggccccagcatccctgcgctttcgaagagctctctcttctcctctctcgaaggacaccgtgtggagcttttccggataaagttcgctcagctgtcaagcggcgaggaaaacaacgggcactatagccatctcagtcccacgtagaatatataagcagaaactcccgttaggttcttagatatccctgatcgggcgccacttaaatgttgcactttgtcaagcacaagttactgtataaccatgttatcatagtactttttacgagtcaggactctaggactgtaagaatcactaggcacttgcattaaaccatccactatgtggggggtgggggttggaaggacctcttcccctgttcatagttcttgtttaacggaagtgcctcccatgcggcgtatactcaacgtaggccagaacaacagcaacaacatcaacagtgccacttcgcacaccacctccaccaccaaaactgacaaccaccacctgcaccaccaaaaacagcaaaaacagcaaaaacagaaatatataccacaatcgagcggttctcatgtgtcgtccatttttgtttaacttttcccatcaaaattctaaaatgatgctgatgctgaagacgaagaatcggtttaaaaagtctgacaatgcctctgtcctatctgcctatctctctcagtctctctcttctactcttcctctctctctctctatctcgctctgtctaagtctatctgtctataagctaaatcatcccaaaaacccattcaaaaattaaaaaaagaacaacaagcaaaacttaaacaatgaatacaacaactttgctcatccgttcgtttctttgtttctctgtattttctttcattacttttgtgtctctgtgtgcccgc
PCR verification status
Line verified as correct.