| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT25945 | chr3L 5261813–5263921 (2108 bp) | shep, CG4669 |
      active |
antenno-maxillary-labial complex, brain primordium subset, ventral nerve cord primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 2 |
| 13-14 | antenno-maxillary-labial complex | 3 |
| 13-14 | head subset | 2 |
| 13-14 | ventral nerve cord subset | 2 |
| 13-14 | amnioserosa | 2 |
| 15-16 | antenno-maxillary-labial complex | 4 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0052423 | shep | overlapping | BDGP FlyBase |
| FBgn0035598 | CG4669 | 32083bp downstream | BDGP FlyBase |
| FBgn0011986 | tRNA:S7:64D | 73371bp upstream | BDGP FlyBase |
| FBgn0016031 | lama | 74906bp upstream | BDGP FlyBase |
| FBgn0052420 | tRNA:CR32420 | 87630bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
caaggggtggagcagatcgagagagacagagaataagctcggctaatcgcacatatttccacatcaataacaattacgaaaaggaccaaggaccaaacaaaaactcatctcatttggtatgcaagagtacggaatatttttcacccaaaaaagattttccacacgatttgccagaggatggaatttaaaattccagaagttaaagcagaacagcacacttaacctcgtcagcagccaacaatttgggttagttgcaaatgtatgtcagttgctaattagctgcacttcactggactccgtcgcatatagaaaataataatgcatattcataggcgcgccttctatgtggcgatgtcacgcatacgccatgtgaaacgccaccactcaaaggtccttgaaagtagcagcaacagtcaaagcaacacgcagctcatgagtgaattttcgcgcggtgggcgtggccatctgcccacttagcacggcagcagaaaaaattaaggtattattgcggtgctagccattaagatcgtataagttgcttgaaagtgatccataaatgctaactttacatgccgatacaacaatttgaatttgcataatacaaaactgaattgtattttgttaaagattttatacaaagatgcactgaagattttgtaaattatacaatacaaaactgaattgtattttgttaaatattttatacaaagatgcaatgaagatttagtaaattacctgagaatgttaagcattctacaagcaattacattgaaaggagcacaaggaaaacagaaattgcagttacaaaatgtttaagaaaatcacatattttaactgaaggattttccctttggtttccttcttttttttttttcttcttgtacttagttttgtgtctgccgggcattttgccaattcattttcacttcgagtaaaattaattaggaatcaacaaaatgagcagaaaagaaagaaaaggcactgagctcagacagtgccttacataaatctcgttcgcctgagccctaaaagtacaaggaaaaaatggcaaaacccaagagggagctaaagaatgaagactcaacaaaaaaataaataaaaaaataaatagaaataataagagaaaaacatttttcactcttggcaatggacaatgaggagagacctcgccccttcaaacaacaatgaaaatgaatgaataatatggaaagatttttcagttgcattttttcccgctgctgaacttatcgttgctttcctttggactttcttcactctctccatggttatttgtaattgaaaacatttttgtggctttatgaatgctcgaacagccctcggaaaagccccatacatccatctgaccaaacaaacacacaggctaataatcattattatttcagatttatttgcggtcattgggcttgattttcgttgtaattattgaaaatgtgctggccaaggcagttttccactttgctaccctcttgaggccaatggtttgtccatttgcttgtggggatttttaatgaaattttccttgttctacacacgaacaatgggtgtcattatcattccagttcgtcagtcagtcagtcagtcagttaggcaggcagtcagtgagtgagcaaagtcagttagtcaaatatttgtataatttgtctttattgtcattgacattaggcacatttgttgcctcgattatctgggcattctttaagtggacaaacagctgacgctgctaatggcagcgggcggaaaagggggtcttgaagtggctctgtggtttcgctggtgggtggttatggtggtttccaggggttggtggttacccaactcagacttttgctattttccccaagataaggtcttccgttagtgtctctatttaagcggtagctgtataatttctagttgtgtaatttatgtcggtaaaatctcaacaatctatacattatacatggactaacttttaagaaaatatttaaatataatgtgattttttttttgtggtgtcataaaaagttaaacaaattcccttcagcaaaaaactcatttccctttcaaaacttcttcagcgtgaaccactcatgcgattcctggattacc
PCR verification status
Line verified as correct.