| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT26124 | chr3L 5613364–5615475 (2111 bp) | Blimp-1, Eaf6 |
      active |
procephalic ectoderm AISN, hindgut AISN, anterior endoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | hindgut AISN | 4 |
| 4-6 | anterior endoderm AISN | 4 |
| 4-6 | gap | 4 |
| 4-6 | posterior | 4 |
| 4-6 | anterior | 4 |
| 7-8 | posterior endoderm anlage | 4 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 9-10 | head subset | 2 |
| 9-10 | ventral epidermis anlage subset | 2 |
| 9-10 | brain anlage subset | 3 |
| 11-12 | head subset | 3 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral epidermis primordium broad | 2 |
| 11-12 | head epidermis dorsal primordium subset | 3 |
| 11-12 | lateral epidermis primordium broad | 2 |
| 13-14 | head subset | 3 |
| 13-14 | epipharynx | 3 |
| 13-14 | head epidermis broad | 2 |
| 13-14 | pharynx | 3 |
| 13-14 | trunk epidermis broad | 1 |
| 13-14 | hindgut | 3 |
| 13-14 | ubiquitous | 2 |
| 13-14 | anal pad | 3 |
| 13-14 | brain subset | 3 |
| 13-14 | hypopharynx | 3 |
| 13-14 | clypeolabrum | 3 |
| 13-14 | optic lobe | 3 |
| 15-16 | brain subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0035625 | Blimp-1 | 10719bp upstream | BDGP FlyBase |
| FBgn0035624 | Eaf6 | 11965bp downstream | BDGP FlyBase |
| FBgn0035623 | mthl2 | 13075bp downstream | BDGP FlyBase |
| FBgn0035622 | CG10590 | 16286bp downstream | BDGP FlyBase |
| FBgn0035621 | CG10591 | 20573bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tcaaagccagtgaatgaaatgcaaagattctgaatttgaatggaaattatgtacacagataatttgttatggaaaatttccaaaacattcctttttgtggaatattcctttaaatttaagttaccctttataatagcattttacagttaactttttatccttaagggtaacatcattgcttatcaaacagatgtcctggcatttacatagctccaacataacaaattacgcgtacacaggatggaggtatccatccttcctgttgctcaacaaagctgaataacaaccctctcggattccatgattaccaaaataaaatctaagacggaacctaacggtgcctccaaatgaatccatttcgcgtcagctgctccaactactcgtttcccgatccttgcagctcggcgatattccattcaacatgctgtcataattgatatccggcggaatcggttgcccaacttgtcatcctcttagacaactgttaacccactcgctttgcatttacagttatgcaatggcagccgcgacaatgcatccttttttgacataatgcccacgttcgagacccagaaacgagtttcctgtctctgtgaaatttaaataatgaacagcgacggtgggagaaaagagagaaaaaagtaagaaaaacccgctatgtggctgaggaggctgctcctttccatttctcgcaattctcacttgtgaaatgaaacgaaatgaagcaatccaaggagcgacgttcggttccgcctctgacgcctacaaaccaaaagatattccgcatggaattctcctactccaaaacaccacgactctccccgtgtgtattctatgctcctggggaacaatagaacaataaacaggcgcagaatggtttggaaaacaacatttttaccgtaatcctttcgttttgagccgcttgagaagcaaacacacacatgcgcacatccccgagctacaatattttcattcggtcgaaaacgagattgaggaaggattaaggaatgttgcgctacctggttcaggacatgagtctgctttatttgaatatcatcagcggaacacagggtacaggtaccgctaaaaacccgccaaggggaaaaaggtttagcggcgtcaggtgctgctgttttcatctttccatcaactaatgaaaaggtatgggatataggattgcgtggatcctcaatcaatttgattgcgtgaaatggagaaaaatgatattttacccccgaaaagatagcgggcaaagaaaggatatagaaattgagtgtttatacaaaccccagacaatcgattgtaacgcacatgttgcgcacacaggatgtggaaggataactcactctactccgtctttctcagcggaaatagcagcagttcggctactgtccgaaaacaattccctaattatggcaaggacacggccataaagccataaaatcatccgtcaaagggttcgtttcgattcttggccattaactggctttctcctttcaaggaattcccttcaacccattctcgtccttgcacggtaggcaaatcagtttagtttcctgcgaaatattgaggccatcggcgtgacgcgcccactttccgaagttcgtcgcttaagtctttcgttttgaaacgaagatgcatacgaaaaaccatgaaaaacaaaaataaaatgctcaaaaaaagattgctcaactgccgaaaaaaaaatataaacgccgccggagttcaacgaacgcacaaaatatataatgaaaataacaacaatgcatgctctgttaccaacagtcagtcagtcagtggtcttctttcccccaccacccccagtccatttttaacgtggctctcagtttgttgaccttctcgattttatacgttattgtatcttttttgttgttgttgctggttggttaaatacattttgggccagagccgaaaatgaaatggaaaagagcgagctggcccaaaatccaccgaattttacacgaaacactctcgccccgaacacgcgcttttttatgcccctctgtcaagattttcggctgcgagagagtaaatatgtatacaactctttttctgccgttcttgaatcggtttttgggcattttgtttttg
PCR verification status
Line verified as correct.