Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT26140 chr3L 5643722–5645941 (2219 bp) Blimp-1, lin-28 activityactivityactivityactivityactivityactivity
active
brain primordium subset, brain subset, brain anlage subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10brain anlage subset2
11-12brain primordium subset3
11-12ventral nerve cord primordium subset2
13-14brain subset3
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0035625Blimp-11687bp downstream BDGP FlyBase
FBgn0035626lin-284059bp upstream BDGP FlyBase
FBgn0085447sif7291bp upstream BDGP FlyBase
FBgn0035627Sse9078bp upstream BDGP FlyBase iFly
FBgn0035624Eaf642323bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ttctaaaaagaaaagcaaaacgcagaaaagatgagacaagcctacatacatggaaaatataaaagaagataatcaaaattatacaaaaaaaaaaaaaacaaacacaaaattgattttttatttctcgtttggttttaaactcacatttgttggttgtgcaatcatctaattattatttttttttttttgttttttgtgcaatagttcgcgaatttatgtttttgtttctcttcgccatcatttgatcgacttgaaactctttaggaatctactaaaataagcgacacacataatactttcctatttgtgagactgaatgaattactatatatacaatactcgtactcgtaactcatagaaaacaaatccaagctccatcagcagccccatcttatagagggtctgctgtggactccacagaaacccagacatttcgatatatattttaccgaaccttttgtttgagcaagcattgtaatatattacgatacgaatatgaatacttctaggcatatagatatatatttatacaaagcacacttacataaatacgtagtcgtagagagctatagctatagctatttatacatacgaacaaccaatggcctatggttaaagcgcccaactttgtacagaaattgaaatctgtttcaggattcaaggaacgtgacgacacaacgtaaatttaaatggagaataaatgactgcttcttagtgttataagtgactctgatttaggtcgaacatacatgcacacatttacactcgctcacacacacacacaaacacacagacacacacacacacaaatgattcaaggatcaattctagaaatcaaatccaaatatatattccattatatattcaataagtctatcgtatacctttattgcaatcaatatttcaaatgtatgaatctatataattacaattatctataattcagccctatatagatcatgtagagcctttgttatatgtacgtatatgtatgtcctatgaaattgtttccccactctctctctcatatacacaaaatgtacaaaattggttctcataaataattaaaaattagaaaaagaaacaacaaaaacgcagcgaatttcatttgcaatcaaagcgaagcccaattaattaaaaaaaaatgcaattaaatgtaatcattttaatattcgagatggagattgagtttctgtttgaaccctcttgaacaaaataaatgttgatttatacgagcctcaaggtatatacacgcttatatatcactcacctcttataccacaataaacgaaataattgactatatgcatatttatacgccaattacatgcgagacatcttaagagaaagcaaaacaagaattatctaattatttgaatgcaacttaaattcctattaattatatatgaaatatctctataaaatatctctaaagaatcacaattaataacagtacgaaaagaatgaataaatacaaaaatatttcatactaaaatcatttgatgcttgagttaaacacaaaaaacgtggcatacttttgggggagtttgctcttatcatattttttaacgtgaacagcttaattatagatcgaacgataactattttaggtgtagtgtattcccactcttatttagtttatactgtaattaatgcaactacattgcatacaatttgattaaattcaattgctccgtgcgaaggcagcttatcgcgactaagagctctttgacggtctgtcactgcaaatggaaacatcaatcacatgtcaatctacaatgaaagtagggcacttcaatgcttgcgcttacatgttaacccccctggacatgcaaattgtgtgcgtttacgcataaaaagatgacaacaaaaaacgtatcctgattatcgacgagaaaaccccgaagggagacgaggtgccatatcgggtcaaacgcgtgctgtgcggaaatgccacatggatggctaaatggagcgaatgcctgcatcccatcgccgtttttctacaccccaacgtgcctcgaaccaccccacgcgctctttcatttgcgattttgcatagaatttcggtctggaattttcctcattttcatgtcagccttgattttatgtttggcaacgttttatagttaaagccgattattttcatggccattgtgtctgcgcccccgttcacaatggcccgtctggatgtgcctcgaaccaaactgaaccgatcct

PCR verification status

Line verified as correct.

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