| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT26323 | chr3L 5972676–5974783 (2107 bp) | CG10479, CG32406 |
      active |
tracheal system broad, head epidermis subset, midgut interstitial cell | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 3 |
| 4-6 | head mesoderm AISN | 3 |
| 7-8 | posterior endoderm anlage | 2 |
| 7-8 | head mesoderm anlage | 2 |
| 9-10 | head subset | 2 |
| 9-10 | lateral epidermis anlage subset | 3 |
| 9-10 | brain anlage subset | 2 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | tracheal system primordium broad | 3 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral epidermis primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 11-12 | posterior midgut primordium | 2 |
| 11-12 | interstitial cells primordium | 3 |
| 13-14 | ventral epidermis subset | 3 |
| 13-14 | tracheal system broad | 4 |
| 13-14 | telson subset | 3 |
| 13-14 | head epidermis subset | 4 |
| 13-14 | midgut interstitial cell | 4 |
| 13-14 | midgut subset | 4 |
| 15-16 | head subset | 4 |
| 15-16 | tracheal system broad | 3 |
| 15-16 | telson subset | 3 |
| 15-16 | midgut broad | 3 |
| 15-16 | midgut interstitial cell | 3 |
| 15-16 | head epidermis lateral subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0035656 | CG10479 | 3570bp downstream | BDGP FlyBase |
| FBgn0052406 | CG32406 | 17632bp upstream | BDGP FlyBase |
| FBgn0053993 | CG33993 | 28919bp downstream | BDGP FlyBase |
| FBgn0035657 | alphaKap4 | 29870bp upstream | BDGP FlyBase |
| FBgn0002638 | Rcc1 | 46804bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
gggtggtctggtattctggagttctggcattccgaatgtgagtgaagtgtttctgggttctctggtaatcctttattttatacaagcacccagaattatgtgtgaaaaccattaaatcgtagtttaattgttttctgctcttgtcaaagcctctggggcactggatttttcggatcttgggtttttccattttcagtattcttcagttttggtttacgactgccggcaagttcaacggattttttaattgctgcgctttgcgttttggttgattttcaatgttctcgttttatttgtttcggttttcgtttcgtttttcccccttttttttcgcccgcccccttgtcataaatcatttggggttttcattttcgggggggtgggagacagcctggtattttgaataatttttgttgttaatttctgttttgatttagctcccaagaagcggcaaacttgcgttattcatattttatagcacattaacttgtctcgccgataattttgtttgacatggttttagtgtctgcccgcgggaaaagcgagattctccttagttagcgcttcccgatcaatcagtcatttatcaaagtttctttcactttacttttcccagctgccccgcccccattcatatttcttgtgataaaaaagcccgctggattttgggaatttctcacacgtttcgttacatatcaaatatgtggagttttttcccccatccccgctatgtttgttttctttttccttctacgtaatgattccgataacgcccacattaacgagaacttttcgtttttcccccgcacacgaacaatgaaaacgattttccagcagcacaaacaattatagcgatgcataaattaagcacaacccaatgtgaataactaatttcctgtacggcaattactaaaaagagaattccactttaattccgattccaagagcaagaccaagaccacaaccaagtgcgcattaaataagcatatttggatgcatgatacacttaatcgctggaaaaatgcttggaggaaaacccgaaatgcaccataaaaaacgtgacaaaatgccagtttgtgatagcgaagtgtgaccctgttttttttccgaggcgcaactcacaaatttatgcacagaaatcaaccacaatgagagtgtgctcgataaggtggaacacgacgaccaccacagatcgttgcgtttttaatgcacagcatttttgatagaggtaggatcggggttagggcctttatttacctccatacttcagagcggacaaataaatcgtaattggcgtacgagggtttcttttttctatcttttttattatgtgtgtgtgtatgcttgataggaaaggaccgcatcgtatcgcatcgtatcgtatcgagtggttcggttttttcatgcccattaaaatggtaagctggaaaactcgcagcctagcgtgaaaaactgaaaagcaggccagagaaaattccgatatggcgttttgcggttacagaccgtttttgttcacagccccttacccattttcccatctcccggaagtagtgaagtgttatcgcgatcacaaaatctctgatatctgcagtgtgctgctgaaggtgccgttttcctttgttttggctcgtcaagagatatggtaggagataggatcccaggagtgcgaacagctgcccgtagtttgcttacggggcttgccgaattttttgcgattattccggaacgatagcgaagcaaaaccgattcgaaatgggatgataacgcttaaaggttacaaatcattattcggatgtcaaacaaacaaaggcgggatgcacaagtttcgtataattaatgaaacttcaaacgtaatgcacttttatttaaagatcttgagaacatgccgaaattgaacatttttaatttatattatgctttatttgtagtcagttctgagggtttcatcattatctaaaattagtttcagtcccttaggggaagcaaagttctcatatgtaagcacttaatgaccagcaataccaactaacgactgccttagtgacccaattttcctggccgatatgctgcctgcttggaaatttcatgtagtggagaaaacccaccga
PCR verification status
Line verified as correct.