Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT26330 chr3L 5984597–5986690 (2093 bp) CG32406, CG10479 activityactivityactivityactivityactivityactivity
active
salivary gland primordium, salivary gland, anterior endoderm anlage VDRC

Annotations

stageannotation termintensity
4-6anterior endoderm AISN1
7-8anterior endoderm anlage2
9-10anterior endoderm anlage2
11-12ventral nerve cord primordium subset1
11-12malpighian tubule primordium1
11-12salivary gland primordium4
13-14brain subset2
13-14salivary gland3
13-14malpighian tubule1
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0052406CG324065711bp upstream BDGP FlyBase
FBgn0035656CG1047915491bp downstream BDGP FlyBase
FBgn0035657alphaKap417949bp upstream BDGP FlyBase
FBgn0053993CG3399340840bp downstream BDGP FlyBase
FBgn0035661CG1047741702bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgggaacgtaaaattcgccaaaacagcacgtgttggttggtaaatggactccagatactcagaacactggggggagtttccacagctcctggttttccatcgagtgctgacatttaaagtagctgccagcgttgaagtgacaaaactaaagataagactcaatcacgtgtagctgacactgacaatcgctgctgagggaaaaaaggcgagcgaaccgaaaggaaaactcgccagcaacaaaatagaaaatcaatttccacgttttaagcaaatgtgtgggtggaatatatcgaggcggcaactgcaagcagttgctttgaattccatatgggaggaagggagcattagagaaaggcgagtggagaaagtggaaagaggtggggcggcgaatgaagagtgacatgcagacaaaacgcggggggacaaagaaggtgtcactagcagggacaggataaatgtgcacaacaccgacagacaggaaaaaagagctgtcaggcgaaggacaaggaacgggcaggattttcatatagagagaaaaatatatattaatcttagaatgatctatttgtgtttgaaagtatataaatctcatatatacagaaaactaggcttgtaaatccgaaaaaatccgaaatataggtgaaaatggcctaggatcagaaaatgaatgacttaatttccttttttctctgtgcagccgtagtagttgggctagtgccgaggacacttttggcatgtttagcttgtttatcatgtcagttgtatgctgctaccggaattggcagcattaactgggaaaaagcgacaggagaacgaggagggaacatcacatggccatgaccatcgagataatgcaagttgctacttggttgccatgccgcttctatctcgcccctctgatctttcccagcttccgcttaacgactttatttgcccaacttgggcaaatgtaaacgccgaggaaaagcaacggctctgtctacgtctgtgatgctccaagctaacaaataaacaaacccaggcacacgaaaccaaacagaaactgaaactaaaccaaaccaaacgcaagaaaaccacaaatagatcttacggatacctgataagcttcagatacgagatgggcactgtggtagaagtactgaaagatactttaagatcggtattgaaaatattgataactttttcaatgaaatgtacttcacatttgtttttgtgcgtagttttaagaaattgtaattcaatacgttactattttacatatgcagattctaggaaatattaaacggaaaatcaatattatggcaggcaagcggttttgttttcatcgacaactcgtttgtttgtgttcgccttaaactaatctatttaactaactacttttcggcggagcccttctgcgtattaagccaaatcgccttgggtttggccacttcgaagccactgtggcagctacttccttaagagctaagcagtttggagcggcagcagctcgctttttgttgcagttgcaggcgggcaaacatcacgtgtgcctcttagaatccttgtggcctgtgtgtgtatgcgtattggtgctgcatacacattaccattgtgtgtgcaggtgaaactgtgctgctgctgtgcgtgtgcatgcgttggtctcactgttgtcactgcaaaaacaatgcactcgacggcgacgaggacagcatcaacatgcataaaataaattttcattcgcattttatttgttttaagctgcgactttacacaaagccaacaaagtgccagccgaccgccatctgtgtttgtcggtgtgagtggttggttatagcccgaccggatatggcctcggatattgaaaagttgttcctggtcttttgccaaacgaagaagtcataaaaccgaatattgtgtttttaaagtgacagcagttggaaattaagttcttgacttttatgttcgttcgccgcaagttcggaattattgatatggactttgctaactgagtttatccccaaggtaaaagcacaaaggtggcatttaaatgcattttacaatgtgtgagcactgaaagtggcagtcgtttatgggattgcatttggaaaaggc

PCR verification status

Line verified as correct.

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