Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT26786 chr3L 6894717–6896823 (2106 bp) Prat2, CG14820 activityactivityactivityactivityactivityactivity
active
head mesoderm anlage, ventral nerve cord subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10head mesoderm anlage2
11-12not active0
13-14not active0
15-16ventral nerve cord subset1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0041194Prat210382bp upstream BDGP FlyBase
FBgn0035718CG1482031309bp upstream BDGP FlyBase
FBgn0035719tow41239bp upstream BDGP FlyBase
FBgn0035720CG1007747874bp upstream BDGP FlyBase
FBgn0035721CG994854374bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tttcttgtggcctttgtttttgcccactgttcgttgttgtttttgcgcatcgtaaccaaatttgaatatctttttttttgcgccctgcaaatggatttttttccacagattttcgatgccttttttcccaactctcttttgcgctctttatctttttgtgtgtatcgctttgttcgcctcgcttatgataccgttatgatgtattttattgccataacaaaaccaaagcagtgccaccagcccgcccccttttgccacaccccttctgcgaagcggaaaccggcgacattgtaaattttccgtggccttttttttccatttctcttggccgcactcttttttttctgcaggcaaccattatagaaattctgttattcctattcagtttttgtatttttttcgggtccgaggtagagcctttttgtaattgttgttgtctttgtgatttggtttaatgttgataacaataacagcaacagcaagcaaacaaatacaagtataaataaccccaaaaactttgaaaaaaaagggaagaatgtaggaagcctggaaaaagagaaaggaacggaagaatcgcaaaactttcttttcagttcattggggaaaagttgcgggcaagggttgacttttatagttctgtcctgattcactttgatggccctaataaccaaagcttaatgagcataacaagtggcttgtcggcaaggattagaccacgcaggacatgtttccttcgactttgagtgtgcttctgctataaatttctagattttccccttttttgtggtgcgtgttgtacatttttattatttattattttgacattcagctttttttgtgccgccagttcaggtttccctgctttctcgtaaacacgcatatagtttgatttacaaaagtaaacaaaaaccttgttgtaagcataaagaaaggcctattccgtttgtatgcctaaagcaataattagagaccacagaactttacttgatttatttcaaagttatagcaatacgacatgttaatgtaattgtcttgctttaagaatggtaaaattaaaacaaaaaaatataactttcatgatatttctgtaatatcagatatttacaattttgaattaaatttaaggtcgtgtttttgcttttcagccaagtacattcttaacgagcccaaatattatcagtaagttcagctaatttaaatggctcataaaatatggattaaagtcgccttaaagtatccatatccgactgcattttgttagcgaagagagccgtatttgttcgagtgtgtatgtctgtgtttgcaacaaagcagtagacaatgcgtaaggatgcccaaaaaggatatgcgagacttgcacagacagccgagagacagacaccaacaacaacacacacacagcactcacacacacatacatttaaaattatgcaaattttattacgcaaactgctgcgtccgtcgccgccccctcaccacacctccacaccagccctgcgcccttcgtccttcgtccttgcaacaggaagcttgtcttacactcgcagttgaacggcgcacaaaaaaggaccttacacccagagtcagaatgcaataagcaattgcaggacactacagcacggagttgaaaaggacgtatttgctggatcaaggggtggcgtggtggaaggagtgaaaggcagtgggagatggacgatgggaggacaacaaagcccggtctcgttttttccttgcctttaaatgaagagcaaagctttcattacgggcaacaatgttaaaattattgagcacaagccaggatgaagaagaagaagaagtggagcaagaagatttcacaaagcgtaaaatgaaaaaaggatacttcctaaaagcaaaatgccttcaaaagcgtttagaaaatatgaatcgttgtaaaagtttgtaacaaaatcataagtcaatataaattaaacactagtcaaatttttgtaaacaaaagagctttggtaatttctatttacgttctggttttaggatataccaaaaatatacaaaacataacatgaggattttgtgattttaactagctttaaaattatttgtccaatgattttctttcagtgcacca

PCR verification status

Line verified as correct.

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