Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT27309 chr3L 7930296–7932398 (2102 bp) Srp9, syd activityactivityactivityactivityactivityactivity
active
esophagus, ventral epidermis anlage subset, ventral epidermis primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral epidermis anlage subset3
9-10esophagus anlage2
11-12ventral epidermis primordium subset3
11-12esophagus primordium3
13-14esophagus4
15-16midgut chamber2
15-16esophagus2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0035827Srp9overlapping BDGP FlyBase
FBgn0024187syd1077bp downstream BDGP FlyBase
FBgn0264472CG438808517bp upstream BDGP FlyBase
FBgn0041156exex10990bp upstream BDGP FlyBase iFly
FBgn0052368CG3236821351bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tcaatcggtctttcaacacatttccatgaaacgattagcatgaaataaatcaagggagaactgaaaaatgcaacgagactaatcaatcttttggtgtttttatcattaatttggtttaaaaaccccattttatatatatctagatcaatcaatctattccaaaattaagtttccaataggtaatgcaaccaaacctgccatatttttcacataaaagaatattttattcgttctaagtattactcatgttacctgaaatggatgtaatttctttcggagcatatcaaaagaatttattaatatttccagcacaagaagagggagtagttggcattcggagacgttttccgaagaactcttaattgcctaaccattaaagcgattaaacagcccgagcaaacagttaacaagccacctgaaagcaggaggaggaaccgaagaaccaccgatgggaactggaaatggacagcggaatgggatgctggctcacttaataatccgagagcaaatattggttatttgcctgcgagaggcactcgagtttatttgccgcaggagattgacagcagcccgccgcaaaagattgatggaacgactggaaccgctggccactggattggacaattggacactcggacattgggacactggacgatcggtagtccacaagtgtttgctgagaatgcagaatgcactccgtttgaggtgggatctatctacatacatacctgttgaacgggaggcaactcagtagccaccttggattaagtcgaagcgtttgcttgacccacagagatccgctcgagcggaccttttgatcagccctccaccaaccctacagttgcagctcaagcggactccatctcacttggccattctggtcattcgattgaagaaaccgtcagtttccggcagcaatatgcatagctccacgacaagctcatttggcttctgtttgaaggagacgcagatgatgacattggctggcggagatcgctggcgatcctctgcccaacccatcggatgtttgtgtttgccccgcattgggctttactcgattttttgtttggatttgtttgcccagtgcattgcattgcaatcacaatcactttaggcagctcgtcttcgactttttaaaaagctggagaaagggtatacatttagttggggtgggacttgatatggtattattataatgttcgatttaaaaatatgaatatccctttttaagcttaataatagaattatgttaacggtgttctaatattatagtgcctatatatagatctccatttccaatccttctaaggggcttgcgagtgcaataaaagccccataaattttataggcagccccacaagttgcagttatcaaaatcaacaaatcaaaagacagaaaccacaacgagcaatctgtaacgctttcatatatacccagtacatacatatatgtacacatatgcgttgaaaaaacatatattttatatagatggtcgattgttgggggggctgctactggtgttggaaaatgggggtcgtaaactggaagcatagcagcgggtacggtggcaataatttcgatctttacaagacgataaagcccatggtttaattaggccccagcgattcttggccgctcgcccttctcaaactgttgcgataaacttgacaaataacataaatacctttttattgcgggtggttgggatgtggggtcgactcagcgggggttgcgggtctgattggggatgtcgatgtctccgggcggtaaggccttctcaaatagacctactagtattacgcggaccatggcggtacgtgctttttacgacacccactgtggcgtcaattataaagatatttaagtacagttagcatgcaattagacggaccacagttgactgtatcgccatggtcagaacgacatggcaatccctctgatttaatatataatatatgtatgtatggttttatatggtatcggaccggcacggccatataactaagtccaattgattgccataactagttggtcatatgacaattagttataaattaagaccaccgatttgttgcacaatctaaaaccagcgcatgttgagga

PCR verification status

Line verified as correct.

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