Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT27700 chr3L 8698072–8700234 (2162 bp) CR44526, SrpRbeta activityactivityactivityactivityactivityactivity
active
anal pad, hindgut anlage, yolk VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10hindgut anlage2
11-12yolk2
11-12anal pad specific anlage1
13-14yolk2
13-14anal pad2
15-16hindgut1
15-16yolk2
15-16anal pad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265719CR4452611782bp downstream BDGP FlyBase
FBgn0011509SrpRbeta13977bp upstream BDGP FlyBase
FBgn0052022CG3202215308bp upstream BDGP FlyBase
FBgn0035923CG651116352bp upstream BDGP FlyBase
FBgn0264696CG4396520548bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gagtattcgcagcactttcgatgggcccccgtcttctttttttggggtctgaattgtgggccttatcgccgcgcacgccgctcgcaacttggagccgctgattggtgcctataaaaagcctcgctgctgttgtgccagtttgttttcgcccgacggccttatcgccagtccgtccgtctatcattatcactatcattatcaaacgatgactggccgatggtgagtacgtacgcgtactcatatgtatgtacataaatcacatatattattttgttattgtcacgcgaccttcagcggtatcacgtgttgcaggcgatcgcgtcgtgatcgtgatggctgccaaagtcggccgactttcccccttgagctatggtacaaaggtggaatgggggatagggcggctagagtcgcccattgtgggtgctgaatctgtgataaagccaatttatggcaacaaacggagcagtgtgactgtgttgattgcttagcaacgccctgctgataatgatgacgttcgtggagatgtacgctgaaaatcttccgtagctttttgtacgaaaaacgtgactggcgccgaatgaatgaagaaaagatgaaggggcacctggaaagcttccacgagtgtggaaaaatttcgacactcacaacgccgctgcgatgggggcacttgtgaaaagtcggctctattaacacccgtttcccagtttcccggccctcccatccacgaatcaaccgggcggaccgactgactgacttcgtgccataaactgtccacacaaattctaatttgtgtcatcgtaaatagcgtcaagttatcaattaagctattgatttatggttgtcgtaaatcgaaaacaataacactcctgtcctggtgttccaagactctgttcatgatggttatgacagccccctttaatagcgtttccactgccaaatcgctggatagcacggcgatcggggattggggatcgcggatcggaggcaccttcaattaaggctgccacaccaaataaccgggcgttacgtgctctcactgccggttcggttatccttaaagggtttttaattaaattttacatgttccgtggacgcaaaaggcggcggcgcggccctcttgcctttttaattgaaatgtgttaaaattactttgaaagtgtgaagtcgctgcacgttcgccggtcttcaaggggatctctctcctcttccgctctgcgttgtgtttttttttttttcgcaatttacgttgtcaattttaacgccccgaaatatataagtttgaacaacattcccaaccaaccagcctttagcgagctcccttagttttcattaaccatttttctgtttttcacttttctgggtatttcattttgctgggtgtgaagtggtggtgttgataactctgaggttcgcttaacagtaagtggcctgcttaattgttattgcttatgacgtcggtagatggaagaggtcccacatatcagatacaaggcctctggaatgctccgtccaaggcttcagataccgattgatgtcactgtgatctcatgtcacctgcaagaccgattgaatctaccgtaggaagttccactttgcagatctactatcaacaaaaaaatagttgttcgttgacattgaaatttgaaatcaaggttgttgtaaatagaaggttgacaaatagaaataatgttgaatttcctatgtacttatttgtatcttttatatacattttaatcattgcaatagtttaattccccttaagttctcaactagtatgagctgctaagaatgttatgataataatatcgtaatttttatttttaggtgcaagtatatatatatctattgttccgcatttaaataagtttatttattttattttaattggttttccttattcccattgtccattgctcgaaaaattccattcgggcaataaactctcccattgactttgctattttagcaaaacgaaaaaaacaaattcgccacaaatgcgtacggagggcaagactcgacaatagactaaaaatttcatgcataaataaaatatatgcataaaagtaaagccgacagaataacccaaataaaaaccagccacaaacgagaaaaatgattacgaaaatttcccagagtaaaacgcgaaatggaatatggaatgcg

PCR verification status

Line verified as correct.

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