Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT27734 chr3L 8764494–8766645 (2151 bp) Fhos, CG6576 activityactivityactivityactivityactivityactivity
active
head epidermis broad, trunk epidermis broad, salivary gland anlage VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10head subset2
9-10salivary gland anlage3
11-12head subset3
11-12ventral nerve cord primordium subset3
11-12salivary gland primordium2
13-14head epidermis broad4
13-14trunk epidermis broad4
15-16head subset3
15-16ventral midline3
15-16hindgut2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266084Fhosoverlapping BDGP FlyBase
FBgn0035924CG657614228bp downstream BDGP FlyBase
FBgn0035926CG580416750bp upstream BDGP FlyBase
FBgn0265720CR4452719726bp downstream BDGP FlyBase
FBgn0040828CG1330621669bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgcctgtctctctctctcttggcatctctcccttttggccaaaaagtattttaactttattgttattatgattgttgttgccatttgttgtcatttgcattgcataagcatcaaaatcgtggccaagttgtttcgctgcactcaaaaaattagtcacgcactcacacagaccagcaaattagtagagcaaatgaaaatccacataaaagatatatatacgatctatctgtataaatatatctaaagagtattgtgtgtatttcggtctgcagatattttgtaagaattcatgtcgcctgcatttcaaaaataaccgcaaaatggaattggacctgtgaaccgggccaagtcgttatatgacacatccgactgtaaagggagccgatctggggaaatgtgccgggtgatctatcaaaatgacaaaatgttcaacacgaagattctgtcatttcttatgtcagattgcagggaaaactcacgtgtgagatgcattcctttcaggtagatcaaaagatgcctttgatagcgcgtaatttagggtaagagcgatttcaaagtgactttcccacgtaacacataacatttatctgaccaaatgaggcacataaattataaaacaactcacattacgttcgttggaatgaggcctttatcttggtcagttatctctagtttaccattgtattaggctcaatgctaatttgtaaggtctagtgtgagagttactagaacctcttcgagatatatatcataaaaagtgttaaattaaatgtcttgctttcatcggacgaattgatttactttggttcgaaaaatccggtaaattagttggactatttccagagcattgagaatgttttcctaaatgattcttcaattcacaaaccctataattttatgtgacctcgttcgataaatcttcttctgacactttcatcttctgcctttgtgtaatatacatgcataatttgaatttgaatttcttctatttattttctttaaaacactttcctctgctcgaatggctaccgtttcgatgcattttccatgcacactcgagcggcgagagtagaccacttctgacttgaccccaatccgcagattcccccagcttttttcacctctctgccgttggcaattaacatattgacacttatgaatcgcacggctccccatatggtaagctgggaattttccagatgaacacgccatcggcgatttcctggtcttagtagtgtcgcctctccatttccgtttcgttcttcggtgcttatgacaattacaggcgtccaaaggcgatttgctggcattgttataattaactgtgaagaagaaccaccttccataatgagttggcattcctggactttggcttcggccgggcatccgctgcatacgaaataagccaaggttctggccagtgtccaatccaagaattcaataaatcaagcgcacacgcacattatgcctatgtatgcacgtgtgtcttccaccgatccacagacatttggattgggttttggagtgggtataacccgatcttgggtttcttctgcccgtcgctctttctattcgttcctcctaatgtgctccagtgttttcctcaaacatttaaccgtttcaaacacaaacgtgacacaattttctgtctctgtgcggcttaatcttgtttgggggcctattacactcgcctacaacacaattgaaatatcagtggcataaagtgttatttatttttctgaatgcttgaagaatatttaagtgtgatggataatacattctttcaactgtaaacaaatagattacgacttcaaagtagcgtttctgaaaaaaaaatttaaaataaacaatattcattgtgctgttaggtcagtgttcaatccacatgcaatttctttgttgaccagtgttaagctcggctctagagttccacatttaagcccaatccgagtttcagtccctgcaaccgggccaatcatcgttgcttgccgtgtctttttattggcagctgaaattatttttaaatgcagtcgcttaacaattttatgtgttgcagtctgttagccggtccgcctgtcagtcagtcattcagtcaagaggtcaaacaacttttctgatgattgccgtagagaacccccaccgattcccctat

PCR verification status

Line verified as correct.

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