| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT27876 | chr3L 9034413–9037584 (3171 bp) | Doc1, CG5144 |
      active |
anterior endoderm anlage, dorsal epidermis anlage subset, lateral epidermis primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 2 |
| 4-6 | dorsal ectoderm AISN subset | 2 |
| 4-6 | amnioserosa AISN | 2 |
| 7-8 | dorsal ectoderm anlage broad | 2 |
| 9-10 | anterior endoderm anlage | 3 |
| 9-10 | dorsal epidermis anlage subset | 3 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | epipharynx primordium | 3 |
| 11-12 | dorsal epidermis primordium subset | 3 |
| 13-14 | head subset | 3 |
| 13-14 | lateral epidermis subset | 3 |
| 13-14 | epipharynx | 3 |
| 13-14 | dorsal epidermis broad | 2 |
| 15-16 | lateral epidermis broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0028789 | Doc1 | 62bp upstream | BDGP FlyBase iFly |
| FBgn0035957 | CG5144 | 6126bp upstream | BDGP FlyBase |
| FBgn0000116 | Argk | 7567bp upstream | BDGP FlyBase |
| FBgn0035956 | Doc2 | 22068bp downstream | BDGP FlyBase iFly |
| FBgn0035959 | CG4911 | 28336bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ctacctgcttggcatcgggaaaaactggctgcgacccacggcgagttagcactcgagcggagctactcgagatcagttcgttgcgaaacgtcgagcgtgaaagaacctcagagcgcatcttcagttacgagcgagtgaataacagtgaagaattccaaactaccagttattatcagaacgtactaagacattttaccaagtgctatacaccgtgcaagtgcttcgaaatgctttccatgcaagagctaatggatatgcggatgcagcagcagctggcccacgagatctaccgccagcagatcatgcagcggattccaggtgcgtttctagacataaggtctatgggtgttgatcgaatgccgtcggcaaatggtttcgcgattttcaaactaaaaaatatgagaaaatatatgcaacccaaaagagcgtacttaaaagtgttttaatattgtgattattattagtgcttcggattttatgagcaataaatattctacttcaatttaacttatcattataactagaaattgtggtcataactgcattgcctttattttcaatctttgattgaacatatcttaataggtattatattccgataaaatacaatagatagcgaaattccagctaacttagaaatatgatttctgcaacacccacctccctgaagaggtccattgcaaacccatgctaatgaactaaccaaaccgcttcttccagatccctttccatcgatgttacctttcaacatgccccaccagcagccgcacatgatgctgcccagtcgtcccaccctgcccggcgtggaggccaagttggagaacaacgatttgtggcaacagttccataaaatcggcaccgagatgatcatcacaaagagcggccggtaagtttcattttcccgcgaacccattatcctatgcaaatagcccgagtttttccaaaagtcaagtgcgtcgcacggcctatgtaaatatttgctcctgtaccagggccaactttcccaattcctatctcatacgagtacgagtatgcctataccctgaacctttcgatttcccgggcctaatgtggcgcctggccataactcaaaacgcagcaggagctctcgctcggagtgacaacaagtgcagtgtagtcggcggaggagaacacaagagcaagacgccgccctggcgccggtccgatcataaaaatctttcttctctcggtttcggcgttgacaatcgggtttggtcgatctacctgcgcttttcacactttgcccacaataccaccataccataccataccataccattccatgccctgtccgtgacccttctccaaagcgatgagaccagaccctagcgtatctcagataggggaactatcgaacagcgactaccgagcgggagccgagacaaatttacataattatgatctgaactcgaagtttaagttgcaaatgtacacggaaagaaatcgtgcaactacaagcattatttttggccaaggcttagaatatggctgggcatcatagaaatcaagagatcttgaacataaatatatatttgttatatatatatatatttcgtaatattttattgaaaatgattaatatccagtagaaatattatttttctgtgctgtttaatccgcgataacagtcactttctcggctcattagacatgcattcgacgcttggaagccgttagggcgactcccagattttgtctaattgcttggcgccagattgccccagctcctccagcactctgttgctccccgtgctcctccatgaaccaacgatccacacaattaatcatgtgccgttggcatattgttttgggctggcaagatctgtttgcgttaccttttaaatcgatgcgttgcgctacgcagactccccgctgccctctacttttcggtccataattacacacttgttagccggggcaacaaatcacaggcgatatgaagtaaaatagaatagatgcccgggcgacgccttcttttgcgatgctccttccctgatttatatgcagttcgtggcaggccacttaatcaagtcctattcttttcatccttacagacgcatgttcccctcgatgcgagtttccctcagcggactggaggaggaggccagctattgcgtactcctcgagatggtgcccattggcgattgccgctacaagttctccggttcccagtgggttccggccggaggagccgagccccagagtccgcagcgcatgtatctgcatccggacagtccggcgaccggtgcccattggcaatcccaggcattgctcttcaacaaggtcaaactgaccaacaatacactggacagcagcggacatgtaagtttgagtgagctcatagtgtatcttttgaatgggttacttatagtttccattaacatttccagatcgttttggccagcatgcataagtaccagccacgcctgcacatcatccgcagcagcgagctcacccaacttccatgggctcctcagcaggcgttcgttttcccggagacggagttcgtagctgtcacagcctatcaggtgggttaaagacaacatcctttccgtcctccattgaggacatgtctgacaggacaaagactctgcgggggtcgtcgcctaattgaggcattttcaaatttgtcgcctagccagccacttgagtttgatcctaacgaggatcacagtggaacttttcaagtgccctcccagccgacggctacttactgacgcctcgtagtttaaatttcgaccagacaaaaacaatagagatcgtttttcatactatttaaattagatttaaaactacgcgtttttttacatatttatttaatctgcaaatcttttttataaggccgtaaatttatttattgttcctttttacgatctaattgaaaattcaagtgttaaaagtaatacatttagagctaattcgttttaagaattcattgttgtataaaaactgatagtaattaatcatttatgtgcttaaattaatttataaatttgttctcatgcttgcagaacgatcgcatcaccaaattgaagatcgataacaatccgttcgctaagggtttccgcgagtcgggtcaatcccgctgcaaaaggaagctgaacagcagcggaaactcgacgctggagtcggaggatgatggctccagtgt
PCR verification status
Line verified as correct.