Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT28013 chr3L 9298945–9301128 (2183 bp) GluRIB, PGRP-LA activityactivityactivityactivityactivityactivity
active
ventral nerve cord primordium subset, ventral nerve cord subset, brain subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12ventral nerve cord primordium subset3
13-14ventral nerve cord subset3
13-14brain subset1
15-16ventral nerve cord subset2
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264000GluRIB17324bp downstream BDGP FlyBase
FBgn0035975PGRP-LA28487bp upstream BDGP FlyBase
FBgn0035976PGRP-LC32965bp upstream BDGP FlyBase iFly
FBgn0035977PGRP-LF43764bp upstream BDGP FlyBase
FBgn0035978UGP45022bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgcaagttggaaatcaacctcgacttaattgggtatgtcggctaattcgtttgtaggcacaaacaaatttgttaacaaatttgcgttaatgccataagaaatatttacacagttttatccacttcttattcatgtgcgtatgtctaaacgactagtatatatatatatatttgtgatgccataaattcaattgtggggagtgtatcttaagtaagcctttcgaccttcaatgaggcatgtgccggcagcaactcattaagccgttggataggaagggatgtcctggctcgacttggtttggtttggttaggaaaaaaagggggtggaaaattcgtgggacgggcggtcgctttggtagccctgctgctgcggtttattttcggctgttattatttgtttaatgaaataaacgcacgactttcatcttcataaaacggcattatggcattagcgccgcaaatttatggggctcacccctctcttccaacttaacacccttccgcccacaatcgtctccgaaatgcggaaaaacaccagcaaagtaatgccacaacattaactaccaaatgctctttaagccacttatttcataacttgcacatatttttcataaaataagtagaatttgtaatgtgtgtttgtatataaaatgtgcaatttttacattttaagtaatattttcgttaaaaatataatccaagatctcaattttcttcttttccatgcttccaatttgctattcctattatttttgttgtagaaaaatatcagttccaaatgtgtaacaaatatatttgctaatatgatgatccttgtgataaccacctcgttatgagtgcatacaattattttagctagattcgaaaatattcagaggaaattgccatacaacatttgatttaacataatatcaaatgggtatgcaaataataaatcaatgaatttactgaatattctaaatcaaatattagggttacaaattatgtaattactgttgggaattttcatatacctcatgaagagtgcctaactccagtttattccatttggttgtgttatcggttgtggtgatttttatgaacttcgctgagctttaaactttctgtggcatactttccggcgttcatgggttcacaggcgctacgtggggtcaaattcgtgagtgggtatggtgtgtgcgtatgcgtgtatataactgtgtgtgtgagtgcgataaacgggtgtgggacgcttaatgtggccctgcagttagttatagtgctgcatctgctaacccaattcccggggaaatgtcatggccaaaacgctccgtcatgcaatcattgggcgcaatcaggacacatacacacactttgcatgcaccatttgcagggctcatttgctccgaaagccgccacaaaccataaggcccccactttccaccccaccacttcttcggcccaccaaaaaacatatagaaaatgtaattttcatatttcttgccaaaatgttctgctggcaagccaacgacagtaacggaaggaaagtttcccagtgatgcatggctggcctcttaccaagttcacaaggcgctgaaatgtctaccataaagaattgaggggcggaggaagacttggctgctggaagaaagaaaaaaaaaaacccggaacggttacatccacatggcattaacaattgatcaggcgggtcttgggattggggtgcaaagcataaaaaagtgttatcaagtagacgagtagacaacaacgaaaaaattgaaaagaaataatagcaggtgccgaattacatgaaaaatcacttaggaaaattaaatttcacatatttttcacttcaacaccgagacacgcggtcatgtcttagaagttgctccctttttcctttcaggcgcatctgtgtatgtatttcaacaccgcaaaacatgagtaatgcgatgttgttcgccaggatctggatgagatgagatgagataagatgccaggtgctaggcaagattgttaatgcattgtctcggaatagaaattcatttgaagtcatctaaatcaattacattattcagcacttggtgtcaaaaacagggagaaaactgccaaaactttggcactgcagcgataagggggtatataacaaaaaaaaaaatccgaaaaaaaaactacgcaaagctaaacaaatcaaaatgtaaatcca

PCR verification status

Line verified as correct.

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