Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT28338 chr3L 9945450–9947662 (2212 bp) CG34356, CG6685 activityactivityactivityactivityactivityactivity
active
ventral ectoderm anlage, ventral epidermis anlage subset, ventral ectoderm AISN VDRC

Annotations

stageannotation termintensity
4-6ventral ectoderm AISN2
7-8ventral ectoderm anlage3
9-10ventral epidermis anlage subset3
11-12not active0
13-14not active0
15-16midgut chamber1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0085385CG34356overlapping BDGP FlyBase
FBgn0036062CG668514253bp upstream BDGP FlyBase
FBgn0026404Nc16129bp upstream BDGP FlyBase iFly
FBgn0036063CG667418801bp upstream BDGP FlyBase
FBgn0259932CG4245519962bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

agccacgttggacgaacatttttggcccaacaaactggcagcacattaatcattaatggcgtcaagttgagcgctttacggccaaacaatttgtgaattacgagccgttttatgtcggttgcaaaaatgttgcgactgtcctttgttttctgttgagttagaaacggaaggagtctgtcagtttttccattcttatttttttttgctgtccattgccattgtctgatgccgtttaatgatgctttagcattggcaattgaaatgacatagactggttaatgactttcacgcatttctcctccaatttttggtttatgtctatagaaactctggtggcagaacatctggcccatgctcaagtccgagatcaacaataacgaggtccttgccgcagttctgcagccggtcatgctatttgtccaggaagccacgcttacggaatacgacacccttatgtcggccaccatgaagtaagtagtcttatttatagcctattggtgaacgagaacaatggtattgaatgccccactgtcgggccacaaataaaaagccagctttgagtatttatcgcaccggaagaggctctgcaaaataaatatactggtcagacgggactttatttataattcatttattgcaaacagggaattaaaggctgcagtgaatagacacaaacagaaattaatttaaatatacgcgtaggtatttatagttttgtgtttatttaaacaaattcaatggcaaaggttgtattaaaataaaacaagcataagtaatatgttagcataatctgcagttcaaagcgaaatgaataaaaatatgaaaataataatcagtcatttagaaagttaccaattaaactatacactttcttggatatatatattcaatattcaatattttctattcaatattatggatattactaaagacagtccggctaaaaaagtttctcaatcgtgtcatttttcatctggaatcccttctgttcttgtctagcgatgagaacttttgtgtttgaacaattgaaaaactttcgcgacacttcttttttatgttattcaattttcatgacgttttattgcgcccactgcgacaggcgacagttcgtattgtaatttatagagcttgactgcgaaactttcccagggtcctcctagccaagggggcgtggcagggaggttgggcgcccgaagtgctcacctttggtggtgaaccatgcataaattagtagagcacacaaaagcccgcaccaaagagttcactactttgccgaaagttggcgacaaactttgtggccacttgcaagacgcttattgacacccggtccatacagaagaaagaaaaaaagtaacctttcacacgcactcttatccttagtaattttcacactaatcaaatctgtgatatatcccagagtcatctacaatacaccgaaatccattcaggccagcgttacaatacttgagaatttgcatttgattatcgagaagacgaaaccggaggatgtcaccacagatataatgcccatgttgttctactccttcgacggatccacgatacaagtgcaggtgagtgctgctccactcggctatgcaaatcacttcgggactggaaaatggaaatgggtttgacggagctgattgtgtaattacggcagcaatttcttaattaactgcgactcagaagctgactcagagcacaaaagtgcccgagcaagtgaatttgcattttctttccgcaaacgttcgtcgcggggtgaaacgaaattaaaattcaataaatggggaaaaaaatgttgggcacacacagaaaagtcagcacttctaggggaaaaatattatgcttttcgtttaggtactaaaaaaaagcataatttaaatgctttcatattttataattttagggtatatttctgactcttaaattctataaaaaaaattatttaatttaacattccgatcctagagcgccgccgtggtagccgtggccaatgtgtttgatagcatcgatgagctctccattcgccgcatggtgctgcccaaggtgaagcaggtgttcgagaagaacataaccgatccgaagattgtgcagaacgtgctgatgtgcatcgaacgggtcatggaccgcatggagcgggcacaggtgggtactctagaatcccatatatcatctcatatatcttcttctcatatctctgtggcaggtcatgg

PCR verification status

Line verified as correct.

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