Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT28544 chr3L 10321816–10324081 (2265 bp) mir-276b, CR44327 activityactivityactivityactivityactivityactivity
active
lateral epidermis primordium subset, lateral epidermis anlage subset, brain anlage subset VDRC

Annotations

stageannotation termintensity
4-6trunk mesoderm AISN subset2
7-8not active0
9-10lateral epidermis anlage subset3
9-10brain anlage subset3
11-12lateral epidermis primordium subset4
11-12ventral epidermis primordium subset3
11-12head epidermis dorsal primordium subset3
13-14ventral nerve cord subset3
13-14brain broad3
15-16brain broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0262381mir-276b8834bp downstream BDGP FlyBase
FBgn0265415CR4432719464bp upstream BDGP FlyBase
FBgn0266076mir-276a36512bp upstream BDGP FlyBase
FBgn0036080Or67d54093bp downstream BDGP FlyBase iFly
FBgn0011569can61606bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

ttcggcatcctcctctttcacaaccgcacttttatcctttcctcagttattgtcagtggaaatgtgcactgagagaaaatatgaaatattgtttgaaaatacaatctatgagttactggagatggaagctatcttttaaaacatttttaatgccactcaactccattacgaattatatataatagtttcctttaaatttgaatatttctctcagtgcttctgcggttgacttgggcggaaaaaaataggtggggcggggatatggagtgcactgaagtgcagattggcagcttcatcgctgttgattcagaactggactgacgggaaccaaaaaacccactcccagtctcatcattaaaaacaaccgaaaataagaagacaacgaaatatttcgtacacaaacaacagtggcagcaacaacaaaaaatcaacccaaataatagcaagtgaaatgtgtttccatgcatacacatacatatatgtatgtatgtatatacatttttataaaggcggttctcgagggggtaaaataaggcttacacgtgtctgggcgtagctgcatcccataatatatctgtatctgcatctttcgcagccgatgcatgtggggatacatgtggccgtaaggtgacccaaattgagaaactcttgtaggagaggcacaaaattaattgaaactttcccaaacttgtattggttatgcagttgcttgaaaaaatcactgaaatatattttggtccttcctgcttttaattagttcagcttagcccgaaaaaaaacttagttggcaaagaaagcatacaaataatccttgtttttcggcttaaaactttcgtcattagtggtaaatactcttatgtgcctattcttaaatctgtccttactaactttaagtaccaccacccaccccactaccactttgcaaaaaaaaaacccaacagcgccagacaatcctttctttttcctgtactttttgcctcggacttttaaccatcgtctctcatcagcacattttcatccttttcctttgctctcgtaccttttgctgtgtgccactccaccaatccttttacccccgcatctttgggattcgtttttaattttcagctgattttttgattaatgcttaaacgtttgctcctttttcatcgccggactcctcgggagccatccttttatgcaaatctccaggcactttaattagaaaaaacgagaaaatggttttttagatggttggcctgggctgggcggggggaaaaatgccgttcacttccaagttttcctcattatgcccgctttttgtgtttgtcatttataaattggaaaagtttctttaagcaaattatgccattttttctctagtcgccctcgccgaaattgaagcaatgtccaaagaagaaccctttcggcaaaaagtaaccccagattgccaagagcttcctttttcgctcagctgacgttttctcaaaacaaacgtcacatggtcttgcttcctttatgatttctttttttatataattttttttttctttttttgttatccccattcagatttgttgctcgagatccctcattgaggtaggaccgcgaccactacgagtcgagttaaaggttctcaaggtccgcgtcttcaggttcccaacgagctggtgacgactttgcatccgcctttgcctctttgctgccttttttgccccggtgcattcaacttaatgtctttgatttattactggccgcctttggcttcctttctcggggaatcgggaatcgggattgggtttgaaatcggtatccgaacgaatctgaatctcaatctgaatcttgaagcgattcccgattgtgagtctgaatgaaagcgaaacaatgcccccttctcatcgtttatcctgttgttatcggttgaccctgctttatgtaggtctataggctactacctcatggcactttcggttttcaaccgccgaacagcagagttctgtgattgctgctgctgctgggttcaccccttctgttcttttcgttttttttttgtgccttcttcctctttcctccttctggctgtgatgtaataaatacgcagcgatccctaaaacccgatccgtatctgtgtatctgcatctgtctctttgttcgcatccgtatggaacatgtgcttgcgcccctcgttggccataaattgccgttgagttgagggaaaatccctgttgattagtgggaaaaatcgaaatgcccaacgttcagaggcgaagaatagaatacctagccg

PCR verification status

Line verified as correct.

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