Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT28545 chr3L 10323663–10325832 (2169 bp) mir-276b, CR44327 activityactivityactivityactivityactivityactivity
active
ventral ectoderm anlage, lateral epidermis anlage subset, lateral epidermis primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral ectoderm anlage4
9-10lateral epidermis anlage subset4
9-10ventral epidermis anlage subset3
9-10brain anlage subset3
11-12lateral epidermis primordium subset4
11-12brain primordium subset3
11-12ventral epidermis primordium subset3
11-12ventral nerve cord primordium subset3
13-14ventral nerve cord subset2
13-14brain broad3
15-16ventral nerve cord subset1
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0262381mir-276b10681bp downstream BDGP FlyBase
FBgn0265415CR4432717617bp upstream BDGP FlyBase
FBgn0266076mir-276a34665bp upstream BDGP FlyBase
FBgn0036080Or67d55940bp downstream BDGP FlyBase iFly
FBgn0011569can63453bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

gaatgaaagcgaaacaatgcccccttctcatcgtttatcctgttgttatcggttgaccctgctttatgtaggtctataggctactacctcatggcactttcggttttcaaccgccgaacagcagagttctgtgattgctgctgctgctgggttcaccccttctgttcttttcgttttttttttgtgccttcttcctctttcctccttctggctgtgatgtaataaatacgcagcgatccctaaaacccgatccgtatctgtgtatctgcatctgtctctttgttcgcatccgtatggaacatgtgcttgcgcccctcgttggccataaattgccgttgagttgagggaaaatccctgttgattagtgggaaaaatcgaaatgcccaacgttcagaggcgaagaatagaatacctagccgtactttgcggtcatctgggcgcagagattatgtcataaagataaaagggggcacaacaagtgttgccttttgtgacccaaggtgtgtgcatcgtaattagcgcggtgttttcaggtgaaagggcgtcttcctgcttctcagtagatgtcagtcattgaggattattcggtatgggatcttgcctgctgtgcaataagtggcaattaaagtcttgttataagaatcgctaacaagctgtgtttaaaccattggcttttgagaaatataatagaaaaacataaaacatgtacaatgttaattaatttaaatccacttaaagtcgctaataataggtactgcgtttttttttattatagccctttttcagatatttatttcaaatatgttaatttcaatattgcaccttgatagactcatctgacatgcatattcagccatgataggcgcgcaaattgttcgcctaatggttgcatcaccgaaacaagaacaacacccacaattagcggctgaacaaaaacaatgcaattgactgtgagaaaatacagactcaaggcgcgaaaaaaaaactcactcaagccgtttgtttttcacccgcttttccctcttggcccccttttgccagctgcgtcatacgcaagagttttttgagttttgagccaagagttctgggcctttggagttctgcgttgagttcgccgttgtttcttgtgttgtgtggggctaaaatgtcacgttcgatcattgaagttgccctgcccccgcttccgctcccttcgaccaaccctctgtgggccaactaatgcatatgccaaagcgggcacgtaggcgcatcaaaaggaaatgtcagtcaggcgacaagcccacaaacggcaaaaacaacacggtcaacattacaccgaaaaaaaatgcagtccattttggacatattccttatcaatacaagaacccgtcgggatttaaacaatcactacagcgaaaaattcgtttccctatcaaattggtgtgcaaaataatcagatcattcattatatggtgtcatattttgttcagtgcactcagccaacaacaacagctgagctttggattccacgttctcagtggtaatcctttggcgaaacacgtgcaaacccacacacagatactgtgcgaaactcacagatacaaaaactcacagatacgaatacgagcaacgagtgtggtgggttctcgggacttgtggtgggctacaaagccacaaaagcgcgccagcaacatgttgactgcagctgctgcagaattgcatttcgcaaacacactcacaccagtcgccgaccgaagaaagagaggtgcatatggggtcagagggagagggcaagtacatgtatatatatgtgcgattatacgactttttttctgcctaccaaaagtcgccgtcgacgccgacgttgcgattgttgctgcggtgcgagtggcttttttagccgccacttgccaattgccgcattcgctattcggctttgaagccgctcgggttgccaaaagaacagttagcccagcaattctccggagaatcgaatggaaacgattcttctgggaaacgaactcgtgaccgcccacgtgtcctacgttctaatctaacttataagaactctatcaccatttgtgtgttttttctgtgcgccaaagagccgaacgttttaagtttttacagaaaattagatgtttgccaagaattagattaaacattttccggcagtgtacttgagtgcttg

PCR verification status

Line verified as correct.

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