Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT29056 chr3L 11242807–11245459 (2652 bp) CR44717, CR44716 activityactivityactivityactivityactivityactivity
active
lateral epidermis anlage subset, lateral epidermis primordium subset, lateral epidermis subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10head subset2
9-10lateral epidermis anlage subset3
11-12head subset2
11-12lateral epidermis primordium subset3
13-14lateral epidermis subset3
13-14brain broad2
13-14ventral nerve cord broad2
15-16lateral epidermis subset2
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265928CR44717overlapping BDGP FlyBase
FBgn0265927CR44716743bp upstream BDGP FlyBase
FBgn0265926CR447151611bp downstream BDGP FlyBase
FBgn0265925CR447142476bp downstream BDGP FlyBase
FBgn0265924CR447132485bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cagttgattgatttaccttgcgaaattgttcaaatttaaattttctacattaaagtcatttgtgtactgtttatgaataatgggatggggaaaacaaattgcaattgagtaaacgaaataagatacttaactcaattgaaagtgggcgatactataaagtgaattaaataaacctaattagtagaggtttatattttctaaattactaactatattttctacatctttttttttgttgttgaaattatagaaatgactaaacaaaaggcgtcaccagctatctattggcgaaaataagcaagcatatgccctataagccaatttatacccgtatatatctgggtgttggccataaatttcgctgatcattaacccatgaaagtcgtctgttggccgacctgaatcacagttctttgttgtttattttttgagaggctcgttttggcagtttgtggattgcctgtttctaatcagcttgtgggggaggcggcggcggctgggggtcgcatttcaaagattgcgaaatttcaaagagtgctcaggtttatcaatgaatttcagtttcagttcggttcacttcgcaatgtgacaaagtcaggggccaaaagtcaaacaaaagaagttctcgtttcaattcatttattatctgacaaaacacatctacataaagctaatgtggcacgaaagatatcccaaagatacacagatacaagcacatatgcgtgcctcatggaatttcatttcaatctgaaagaaatttgattttatttatttgagccagcatcaccagaagacaagttggatttcagcttttcttcttgagttcctttatttttttttcgggtgggcagggcattcatgagatacatttcaatctttcgttttcaatctacgtgcagcattttcagctttggtcagcaaacaacaatgccggctaaaagcgaagaaaaaaataaaatcaccatcaagatgaagatggcaggaaaatgcattcaattgaaaggaaaggacacacagccatggatcatgatatgaatatgaaattatgccacatctcacattttcatttgctgatgaaattctccatgaattcataagaacagctcctcgaaataaacggatgtgcgagtttcatatcaaagagcgagcataaaattgaaattatgatgaaattcgtcactggatcgaaagaagatgtttatagatttaacacgttacttgtggcaaaatgaaagttcctggaaaattattttatatacggaaaatttgcatatttggaacaaagtggaatgtataattcgtaatgataatatgaaagaaatgcatttaacgtaacattaccaaatgtaatgatatgtaatgaaatgtttcacattcagctttatcaataaaatacgcacagattagataagcaacaaagacagcaatcatgaaatatatgtttttgtgaaattaaacatttgttaacaaaggatttattgcattttattttatatgtgctccagtttcgccatatgtgtaagaaaagtatatattttattatttagtttttttttagtaaacaacaaccggcctcaaaatttaaaatgtaaattttcaaagtagtcattctataaaaaaagcaaaataaaagcataataaaataatagtggcctgatatttcacacctattccagctcgtttttcaaataaatttgctgttttatggaaccaatttactaccagattagaataatttaattgattacattttttgaaagtcattatggtataaaaatagaagaattttatgaaattgaaccgaaatttatttttacgaataaccataaaaacgggcacagaatattttattttattttatcagaatgttaacttcgagcgttacaaacaaacatgaaaactaaaaggaaatgcacacaggcagcgcttttattaaatatttaatggaagtaacgtttgcacaaaaactttgatttaatattcctcatagggattttcctgcgacttgatgggtttttctctcgagatttacttttttggttgccgaagcgcggcgagcgctgtaaaatttgcattcgcccgcttccgtggaaaaggcgaaaaggaaattctgaagatacattcgtatcttgtagctggtatctctcgtatcgtttcgtatctttttttgcggcctggcaacagccgctatttgcagcatgttgcaacttgcaactgagttttcgttttcggagtggaaaattttttttttagcctgccagtaatgccggggtggatttttgttcttgcctctttttcaattcacttcgttccattgcatttgtagttgttgttgttgttgttgctttattcgtttccttgcgggagaacatttccaattttcatccttttcgtggttttctctcaaattcggggttttcttttcctcttttcgcgtcacgtacgccgtttgttatatccctctctctcgcgctcttgcgctcttgcgctctcgtgctctttcgccggcatgagcgcgcatgagcgagacggcggacgcagagatgagtgaaacagctgtagcgtcgatgagtataaaaggcgggcgcaccggcgagaaattcatagtagcttcgaaaaaaacactgaacacagtacacaagaaaacagactc

PCR verification status

Line verified as correct.

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