Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT29790 chr3L 12662062–12664276 (2214 bp) CR44552, CR44553 activityactivityactivityactivityactivityactivity
active
mesectoderm anlage, ventral midline, head subset VDRC

Annotations

stageannotation termintensity
4-6posterior endoderm AISN2
7-8not active0
9-10mesectoderm anlage4
11-12ventral midline3
11-12posterior spiracle specific anlage2
13-14ventral midline3
13-14posterior spiracle2
15-16head subset3
15-16ventral midline2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265745CR445526716bp downstream BDGP FlyBase
FBgn0265746CR445538868bp downstream BDGP FlyBase
FBgn0263379CR4343115873bp downstream BDGP FlyBase
FBgn0052111CG3211120683bp downstream BDGP FlyBase
FBgn0014343mirr24677bp upstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

gcccttttcacatagatcgtattctagttgcatagtaaattcattttaaaatattttataaatattttccctaaatttcttacaaataaagaagaaaggccagagtcgactttcatacgggcggacaagcgtacgggcgaacatgactagaccgattaagaataaatatacttttttgattcgtatatatagatatttctgatagctgtttcgaaatttcattatcagtcctgacagtgtattaaagtttcacctttgtccgcagatttctcttttttttcggctagcccgactgagtctgttccgctgggagacgacactgttggaggcgatgtcactgattccatctccgctcaatttagcgccagtgcacgcgaatggagagctcggctcttctccgtgcccaactgcacagtatccacggcatcactatccgcaatccactatccgagatccgtgatccgtgagtggaggcgaggcaagttggaacgctctttagattggcggcacgaaacgagtgttccgtggactggcttggaagtctaccgttactaatagtgcacatagtgttttatgcatttctcgccattcgtgtatcacatatgtacgtaggtatagtaattccgtgtgaatccgctctcgagtgataactgtgcttttgccccgtgttcgagtcgcagctaaagtgataattgccagctcattatcagcgttttgcgtgagcaattcgagccgtggcccctagatgcagtgcatccagcaatctgcagacacgtctgcgcggcttcacttatgcattaagcattctcgcagtgcatatttaagtatttcagctgactgctcaggcattcgcacaataacatgctcgaaacacttgttcttcagccgcctaattaagtggagatctcagtgggattcactgtgaaaagataaataggaaagaaaataaataggagcccttctaaacgatacttgggcttaatttccaaggattatagatactaatgccatttataaatttattcactttgagtagctgctcaagcaacttccatttagttcccaacctttggtgtcgcggatcacttcccagatcaatgaaagggaaacgcagatcgtggcatgtgggtgatcccttctgctgttcaccatggaggttaactgggaaccggcaactgggaccattatgtccgcactaatgccgctcccgatcgactgcccatgcccggacgaaggtgttatacgtgccgacagggcgacagctcggatttggagggaaaacatgtgtaggtaagtgctcaaatcgcttgtagtgccactgtgggccacattcagcgccgggctgcatgcgaattagaaattaaattcgatgggtatgggtgcatgcgcatgtgacatgtggcacaaaacaaaaaaaaacaaaaaaaaaaaaactgcacaatgcgcaactgcagcggcacaaaggcactagttctcggttgaggtgttcgactgcacattcctggcacttttcctccatgaattctaagagcgttcccacgacatttggagcatccactccactagcctccactggtaattattcacgtttggcccggaccgggcaaactggactgtataaatcaagcggcacaggcaagtcaaccgtttggcaattaaccattttacttctattagcccaaacattgttaccaaccggtggcatccggggaagtgccaccacttcagttgcaccttcataacaccttgttgcagttgttacgcagtaattttacgacttttctcggaacaaagtcgtacaaaacggagcaaagctgctgttgtttttaaagaggaaatgctctgcatggtacatataaccatcaggcgataatggtgtgtacataatttccactcttttacgggaagacagcacttatgcgttcctaatggccacataaaagtgtttcataattcttcttattttcagctagacattatggatgctataggcacaggcctatatggctgaatggcttagagatcggctaactgatggcttaattgcagatcttaaagataaatttcaactagtttaataggatgggcctataaaaaagatagaaaaatgtagttacattgaagaatatgtatactaggtagctataaagtggctaaatgtgatagtaacaatatagcaattgcttaccaaaagagcatgtaaacatatccgcca

PCR verification status

Line verified as correct.

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