Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT29792 chr3L 12665502–12667664 (2162 bp) CR44552, CR44553 activityactivityactivityactivityactivityactivity
active
proventriculus, anterior endoderm anlage, esophagus anlage VDRC

Annotations

stageannotation termintensity
4-6anterior endoderm AISN2
7-8posterior endoderm anlage2
7-8anterior endoderm anlage2
9-10anterior endoderm anlage3
9-10dorsal epidermis anlage subset2
9-10esophagus anlage3
11-12dorsal epidermis primordium subset3
11-12esophagus primordium3
13-14proventriculus3
13-14esophagus2
13-14dorsal epidermis broad2
15-16proventriculus4
15-16esophagus1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265745CR4455210156bp downstream BDGP FlyBase
FBgn0265746CR4455312308bp downstream BDGP FlyBase
FBgn0263379CR4343119313bp downstream BDGP FlyBase
FBgn0014343mirr21237bp upstream BDGP FlyBase iFly
FBgn0052111CG3211124123bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ggctcttggatattgactccgcctgtccgcggatcgtcgcatccattatgacatccgacactgctgtgctgtttgcgcacatttaacggattgctggctctgcggatgcgtttcggcaaacaaatgcatcgatgctgctgctcttgcatctgaatccgcatctgcatgtgcatctgcctctgcctatgccgttggcaaatagaaatcgatggctgccagcacttgagatctgaagatcggaagatctgtgcatcctcagatcttcgtatcggttccgagtcgttgaatgacaagtgtccaaatacaacaaacgtcagcgctgtttttcgagcccgtcaccgcagcactcggctgcattcatcatccggcctgtttgcccattcgccgagtatatatttgcattgccaggcgatttgcatggcctcatggcgtgttttcccggctaatgcctcggatttagtcagctagctgaaggagacagaaacggagtggaaccgagatggcgaatcagacgccgccggtttgtttagtgcgcgtgcgcgtgttcactgtacatggctcactgtagtcgtgcatggcgcaggcacaagttcatgagctggcactgagagaaataatggcaatataatcgaccaatataccaatagctactcccgaaagagttcactatcacttaatgtttaaaaataatatttcactaatattaaactaagcacattcacttcaagctgagtttttttaaatgtaagatgcttgtttggttcttttaattatttgtattggtttttcttttctgtgcacgcactcatggcgcagagctgcagctgagttgcagttgcagttgcaggcagagccgctgatccgcggcactggcaaaaggaatgcctgaaatgtttaggccgagttgggattactggcgtccaaacatcggtggacttcaaagagccgcggacatttgatggtaattgccgctaaacgattttcaatgttagcttgtagaaacgttaacattttaaatttgtgttatatactcacggacatgcgtatgttaataccccgacatttacccattcgtacacccatgcgtgtgtcgttaattccggacttggacttgggcctcctggtctctcgtctctcattagtggaatgcgacgatcctgtttggtgaggggaaaagggggggggggctggcggaatggcggcagattcggttgccccggaggcttgtcgtagtttaatgcacctggtaagttggctgcactttattgggggattcataagaatccatgcccattattttgcataatttatatcaccgcttacgtaatggcggcgagcacataaaacctttgttcatataatgtgaatatggtagtgcagataagagaattattgttttttgtcacctgaattgaattgagtgttggtttttagtatcttaaagttatatatatgtttatatactataattaaaatatagaaggactacgcttacatctcaatcaatcgcagaatttctgacaaaagtataataaaactggtcaatatacgcctctaatttatgtgaagagcttgacatgcaaatgcccaactggcttatacacacttttaatggctataagatggccaggatggaatgcttgtaataaccttgatcgctgactcagtgaaaagcgaacatgaatggaaagcagataaaagagtcatctgtagagtgccatctccggtgtaatattgtagaacaatattgatgactacgacttttcgactgcgaaccatggcccatggctgtacagatgtatgtatggagtgcaaagtataattctcgatttctcgaagccaaatcagctcattacggaggctaatgtaagcacaacaaagccattctgacgagatttattcaaaggctttaagtgcttggcagcaggatgatgcagcgctaatgacaccagacacgacttcttcgattcgtattctcaatctgaatctgaatccgaatctgaatctgaatcggtatctgaattggtatcggaatccgttcgattgcagactacagatgcagtgaaaagaggtattaacaaaaagaccagtactcgcatagtgtttttcttgctttttttttttttttgtttttgaataaagaattggaagccgaacatgcga

PCR verification status

Line verified as correct.

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