Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT29795 chr3L 12670748–12672856 (2108 bp) CR44552, mirr activityactivityactivityactivityactivityactivity
active
ventral nerve cord primordium subset, ventral nerve cord primordium glia, head subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset2
11-12brain primordium subset2
11-12ventral nerve cord primordium subset3
11-12brain glia2
11-12ventral nerve cord primordium glia3
13-14head subset3
13-14brain glia2
13-14ventral nerve cord glia3
15-16head subset3
15-16dorsal epidermis subset2
15-16brain glia2
15-16ventral nerve cord glia3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265745CR4455215402bp downstream BDGP FlyBase
FBgn0014343mirr15991bp upstream BDGP FlyBase iFly
FBgn0265746CR4455317554bp downstream BDGP FlyBase
FBgn0263379CR4343124559bp downstream BDGP FlyBase
FBgn0052111CG3211129369bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cggaacgcacacgacctcgggtcattttggtcgctgcgcctgcgcaaaaccgcaacgagtcctaagtaaatatttgcacagagcggcttggggttagcccatcctgctaatgcgatgtttgttaaacgactgttttgccagggatttagtgcttgccgctgtggttattgtgtgaaaaatccgtgtttgtgcctagcgcttaaatttattgactactagtaggcacgaaaatgccaatgtaaacagaactttagaacttggaggagagctacctccggcgggaggaggaatcaaatgccaaccggaagcaactcggaacggcgagtaaccatcatttaacaaacccaaaagtgtctggatgatcgtatatgggtatataaccgtatgtgctaattttacggttgacagatagaaagaccagctgtatacacttaacaaaaaaggataatgatttttatagtttaaaaatctttggagaagacttgaaaagatagttgctagctggaactcattgttattttcaaaatataatctttgttcctgtttttgtggtatttgatgagagatgggctttgatttttctccgagtgtaagcgggtacttggaaaaagcaccacctccatgtttgcactgcccgcatgcgctgatggctgcgttttcaatttagtcgggagttggcagtaaacgccataatttgtacccaagcgagttgcgtcagtaaatccaaagatgacgagtctcctcctatccagcaaacgagggcttctcctcgtccgcgcgaaaggggaggagtgaagtgtggatgaggatgaggaacacattcccggatcgtggggcacgcgacttaacgcgccgctctcgccccggcttattaggttaattacgagtttttgattggtaaattaaggccgggcacccggggcggctgaaagatggaagagaacttgatgccggatcgtatccgtacttcggcacgcggcaacccgctgctcgcgccagccatttcgaaatcagttcttaactgaatgcctcaattcaaatgcgtaaataattaatttggaagccatttaggcgtctgtctgccactgggtgtctgcaagtctggctattgacgccctttgtatctttgtatctcgccgatacagataaaccacccgccgcgcctcataatttccacagccgccgtttttttttttgggggcggggagtccccatgaaatcccgcgaaggtggccaaacactcagaacccctcgcctttggaattccttaatgtctctgttggggagttaaatatttaatcctttcccagtttattggtgctatacaggtgtttccacagtagcattatgggttctaaaaaatccattataagagcgagaatggttgaaatgggcagctgtttgaacttggacaggtgggaataaaaaaggatgggttataacaattaataacaaaataaacaaaataaagacttcttagattaataaataaaaagaagattttaataaaatctaataaatatttaacttgtcttaatagtcatatttcatatgttttgaccatatttcaggcttcgattttccatatagagattggtagcttatacaaataaaaaaccgcctaatgaaaacactcgcttataaacgttgtacaaacaaaaccctagatgggttcaatccgctaattgaaccatcggcattacttttcccgggaagcggactctattcaatttgctatcagctagctagcttttcgcctgcatctgtgaaagtaatctataattctaatgtatggcattgcgagcagagatagcagcgcgtggcattatcagcagcgataatgaatacacaattaccgccgcaatcgtaatcggttgccccagcaaaaaaaaagcagaaatatttactaataaatttgcgcaacaacaccagtgaagatacatatattggagtctgatgtttggcatttgaatatggccaccataactttgtttcccctcgagcacgctggaaaagcactcgtagcacattaaggattcggatcagtcacgtactgacataggtaacccatgcgtatctgcatttgcacttgcgtcagatacggataca

PCR verification status

Line verified as correct.

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