Fly Enhancers @ Stark Lab

ID	Coordinates*	Neighboring genes	Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16)	Strongest annotations	Order
VT29804	chr3L 12686842–12689763 (2921 bp)	mirr, CR44552	active	proventriculus, midgut subset, proventriculus primordium	VDRC

Annotations

stage	annotation term	intensity
4-6	not active	0
7-8	not active	0
9-10	not active	0
11-12	proventriculus primordium	3
11-12	dorsal epidermis primordium subset	2
13-14	telson subset	3
13-14	proventriculus	5
13-14	dorsal epidermis subset	3
13-14	midgut subset	5
15-16	midgut chamber	2
15-16	proventriculus	4

Whole-slide images

All stages Quality: OK

All stages Quality: OK

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Neighboring genes

gene ID	gene name	distance	links
FBgn0014343	mirr	overlapping	BDGP FlyBase iFly
FBgn0265745	CR44552	31496bp downstream	BDGP FlyBase
FBgn0265746	CR44553	33648bp downstream	BDGP FlyBase
FBgn0261933	SmD1	39622bp upstream	BDGP FlyBase
FBgn0263379	CR43431	40653bp downstream	BDGP FlyBase

UCSC snapshot

Sequence

ccgtcgttctgcgagctggattcaaattcagtacccagattcagaaacagaatcagattcacacccagatactactatttgctgccgccgcctctggttcattcgtgcttcgttttcgcatcctccggatagagctgctcctcccgaataccgattctaccaattctacaaatttaaacgactcacataaacgattcccgtcgagccgcccgtcggattttacggatttacggtgcccagtagcgcctgtgttggccagctaactcgagttggccagctccttgcagccgtcggcaagtgcaacgcagtgcaacgaaacgaataacaaaaaaaaataaacacagcccaaagaaagtaaacactgaaatagctcgcaagccggatccaaaatcaacataaaaactagttcggatcaatcacaagatcacagatcgcacaatcacaatcacttcactcggattataaatctatctaaatacacatacgtcggttcagtgcgcgagtccatcggtgcatcgtaactctaagatttgctttatagttttagttaaaagcaaaaattaatattaaatgacagtgcacagtaatgaaaccggtatctgtttagtaatggtgcgtatatcaatttgttttttttcccccattttttattacttgtaagatggttcagttaatcgctgcattttagcttgtctggcatttggatagtggcaattagattgaaaacccgttcagctacgaggcaaatcagtgcaacacatgtagataaaagcagaaacagtgggattactctgggttcgaataccttagcattttgatttggcaaacggaagacatggatttaaaaataaaacagattgaaaatgtcaggaccacaagtgtgctacattgggcgaacaacacgcgaaaaaccgtctgccaattcggaaaatctctcttatgcatcaatgtctctttggttgttaaccaagctggcaaggtcaccgcacatcgtgctcagtcacacttgagtgtccaataggattttagccataataatccctcagtggtaacacgatccccagttaatatggtatccctgttccaaaaatttaatcgcttgcactcgacactcgagcatattcatatattttcatatatgtatgtaaaagcaacttgtggcgcaaagtcgaaagctgaaacggaatatcggaaatattaaatgctctttaaacaaacatgaatggctgtcactctaccctcgccatcataatggctacccgaaaataatttactttagccgcaaaacgaccacttcgagttgagatatttgttgtgttatagttatagcctgtagccatagatagtcgataatcatcggcggttgattcaaagagccgcattgataagaaatcgtacgagtgtattgtggatccatccagccatccggcaaacaccgggaattaatttttaatcgcatagggccacttgagttgtcacttgatgaaagcacgagacgcaacaccgaaccgaatcccaactgcaacagcaacatcagcgacaacattgtggcggtatcaatcacgaccgatgatacaacatgcagcactgtgaccgccggcctgcgataaaaatcgtatcttacgcctcggatcatttgtaaaatgttaaacgggaagagcggctccaagccccgaagccccgaagccccggagcccctggagccccaaagcccacagccccaagcctcaagaagtggagaagttaaccaaggaggcagcgataaacaaacctgaaacttgttttccttaccccatgtcgcatgtgtgcgaatgtgtacgttgctcttgtccactgaagttgttgcagttgttgctcttgcagttgtttcagttgactaaaagtgttgacaaaagtgcgcgataggcttatgtgcacacacaaacacactatataccatgctataccataccataccataccatatagaggatcgatccaggcagtcattggacaacttacaatcaaattgctcttaggacgttgttgcagcttgtcgttgttgttgctgttgccgctgtcgtcgttggcagcaatcggctgtgtaatttaaatcaatgttgtcaatcgaaaacatgatttgttggtaatggcggccccactttgaagatcgccggatcgcaggggaaaggggttttcgggagtggagagaggagagagcacagtttgtagggggggaagaatccatcggttgggatcccagttttgtggttctgaggctctgcagttctgaagggcccgtggacagcccacaacccatcccactgaagagacgctcttatcgcactgataaggggctacgtttttaattaagttttagtgccagctggtagcgcggtacagtagaccgtctattggggctttttatccagcgcaagaagcagcgccttaatggccgccataaactcgagaaacgaattggaaaagatcaaagtcggataatcaatttactgaaattaacttcaaagatgaagaacatttttctaaaaaagtttcgttttagaaagaggccttaaaacattttattataagctatcaagggattagtagtgcagtacttaaatttataaattttatttattattttatttcaaatttgtttacttattgtacaacatattgttcataatcaacttggacagctatttttagtaccaaacgcttgttagctccgttaagcaaatgcactcaacgttgttgtcttccacttaacttgcagaatgccgtttcaactcaccttgccacctcgtcgcccaacacgcctccaaccaacgctccgcagagtccgccctcgacgctgcccacgctcgcctgtcccgccgcccagccgctgagtgcaccgggaatcgccgggccaggacacagtggcatggtgacctcgac

PCR verification status

Line verified as correct.

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