| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT30021 | chr3L 13111126–13113228 (2102 bp) | trn, CR44554 |
      active |
hypopharynx, pharynx, atrium | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | clypeo-labral primordium | 2 |
| 13-14 | posterior spiracle | 2 |
| 13-14 | hypopharynx | 4 |
| 13-14 | clypeolabrum | 3 |
| 15-16 | pharynx | 4 |
| 15-16 | atrium | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0010452 | trn | overlapping | BDGP FlyBase iFly |
| FBgn0265747 | CR44554 | 16077bp downstream | BDGP FlyBase |
| FBgn0053262 | CG33262 | 18243bp upstream | BDGP FlyBase |
| FBgn0036346 | CG11251 | 28058bp downstream | BDGP FlyBase |
| FBgn0036345 | CG17300 | 30738bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tcaaacgaaaacagaaaatatacgcaatgaaaacaaaactcatttgaaaactaaaaaatacaactgtgtgtgttcattctgctcttaatttagcagattttcctttcagccagcatactgccgtggaaatttgcctttaattatacattttccctgtgcaccggcaacttttcctctgtgtcaatttgtctcgacattttcacttttttttccacgagctcaaaacttttgactttcaattcaattaaaagtaagttgagggcttgcataccgtgctcgggggaataaaaaatgcagtaaaattaatatactattattcaatagtaacaagcttgaaaacttttgcagacccgactcaagcagagcgtggcaagtggggaagaggtataattttcaattcaatgtgcatggaaacacatgtgtaactactaccatatacaaatatatatgtataagtgtatatatgggtacagccaccccttcattgtcacctgcaatgcagctgccacctggcggaccagaaagttgccaactcaccgtcgaagtttgcccctgggaaccctcaagaaccctatttttcgttggttttctcttttcgctcaatttcaagccaaatcgaaacctatttagacaattacgaaaatagaaatcatttcagaacttccagcgagcaatgtacggtaataacaataaataaataacaaaggcaaatagcggccagaaccaagccccccaaatggccaacaataaaggcggctaagaaagagtaaagaccagatactcaacctctgactgatttccccattggattccggctgctggcggggaatccatcatcaaatttcgattaaaaggcgcgtgtactcgagattcgacactcaagaacgagaaagagtgagagagagctaagacttgagagtcattcgcactattcaagcttcattaggaggcaaagtaacgaaaacattttgatttcgatcattacaatttcctttcatggcctccagttgagtgaaagagctaccgaaggggccgctggcaagggttagtggatcaagcttacgaagcaaaagcgaatgtaatcattaattcgcctcaacacacgctcagccgcagatacggatacagatacagatacatggcgatatggtcgcaaagatacggactccaacaccgagatacatttacagattgtgttccacccgaaacggattctgagtgaagactcggaacctcaaagccccagctacccgaaggcaataattatcgaaccgaaagcccgactggtccacatgtatattgaagaccattgtggcccatctggctggctgattgtatgatgaccatgttgaaaatgctcattaaaggtacttcagaaattaaagcatttcacaattgttccaaaagcgagagctcccccagatcaggtttagagttcagagagattgagatttcgttttcgattcggcccgccatttatcagatgttgttatctatacttggcttttggtcttcgttccgaagctcaattaacgtggtcttgaatgtctttctgaggtcaaacttgggggcgaaaccgatgatttttggttgaatgtaaaaggggtaaggctagagagaaaagaaaggctagatttaacacttaaattcattcttctggctgctttcatagagttgctggtaatttcatttttccgctgccacaattacatagtgttaacttttgcggctggtttctttaaagaataaaaggaaatattctagtttttgataagtgggacacttcggttttcaaagtgttaagaaagaagtataattgatgccgaatgctagcatacctaatacgatatgatttcttaataattagaaaagaatctgtttgtcatagggaaaaaaacctgcttacaagtttcttaacggattaatgcctcatcttagcattaagttagtcggttacggattcacttatcaccctatttagtcatggccgaccataaaacccgaggcaggtaacacatgaaacttaagcccggggcgtgaagacacccagccacagatggatggattcaacagctcccccctccacaaaaactcataaagtgc
PCR verification status
Line verified as correct.