Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT30528 chr3L 14109855–14112060 (2205 bp) Sox21b, Sox21a activityactivityactivityactivityactivityactivity
active
clypeolabrum, atrium, clypeolabrum anlage VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10clypeolabrum anlage3
11-12clypeo-labral primordium3
13-14trunk epidermis subset2
13-14clypeolabrum4
15-16trunk epidermis subset2
15-16atrium4

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0042630Sox21boverlapping BDGP FlyBase
FBgn0036411Sox21a8638bp downstream BDGP FlyBase
FBgn0000639Fbp118703bp downstream BDGP FlyBase
FBgn0036410CG810030792bp downstream BDGP FlyBase
FBgn0005592btl33527bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

ggaaccactgtacatcttgacatggactcaaaatgcagcttcgtttcggctcagtttgaggttgccatggtgtgtgtttaaaataattgccactcgaaatatttgcgttctttgttcggtcaactctttcatttcgtttaaataataatttttctttcggggtcgccatcgccgtttaattgggcgctgaatcagctatttcacttggaaatgagtgtgtcagatccgtagagagagagtatctacgtatctggtagatgagatgcctggaagtcattatcaattgccctaaacggtagtcgtccatctgctcttctggccttttgtggccaagttgataattacaggcgccgcttattgaaagtcttcagcatttatttcattgatggcgctatggatttgattgagagtccagccgaattgggatcttccaccgagcaattaaattcgcttagacaacaaagtttccatcaaccgcaagaaacacaatgtatttatctgaaagatttcttccttttcaactctttggcaatttcaagtagcgacggttttcgatgccatcatcattgttattatgataatagcggattaggttgttgatccattgttgtcgatctttttgtaatgaccggttgcagtaaacaaacggaagctctgttgtttggaattttatagaagcggttttcaatggactgtatcccatcttataagaataattgtcttaagaactgttagacatctcaaaacagggcaaaaaaaaaaacatatttcatgtaattttgtatatacctatatgtagattgtattaattcttcacacaaattccttagatatatttatgttaaaataattccacagttgactgcactttctgctttccaaatccctttctttacacaaagtgcactgatggggaagccacgagccaactaaatagactaattcgctttatttattacgcatttcctagcatttttattatcatttccgctgggcataaatcatccagccccgcgaaggggaaaggcaaaggactcgggactaacttaaaccgagaaaacttgcgttaaattgagggcccaggctcatgaccgggataacaactgctcggggtgaaagacaaaaaacgtgacaaatgctaatttaaaacctccaaccagcgaccaaaactacatacaacccacccacttccactccccgtttcatgaccatagaaaatcatgaatggaaacttatgctcctgcttatggctcatgtcacatggctcttccctgtctgtctggttttccttttccccgatcctctccagtcactcgaatgagttgctaagccaggatgatgacttcacagtttgtcagccagatgggtggtggtcccatattgcggttataaaggattgggggaatagttttccattgactcatacccccaaatcctatttatttcgtgtcaaatttgcatttgtcttgtgcttcagccgctagtttgcatattactcacttattattatgcctagcgctttgctttatggattttcaggggctcttaatgcggtagtttttgacataattcgcgggtttttcaattatgaatagagttttcttaaagcgatttgtgtgctttggttttcgctttggaaaagcgaatttcatataatttaattaataattttaatgtgtggaatgctcacccgctcttaacgcctccacgggcacagatggatatggcattggataaggatagccatcgcgtctcagagcttttggctttcgtcgcggtctgtatttatagtccggatgttccttcatgtgcatggccctatcgaaaagtaattcctgagttagtaatccagatgtataatcccgaataagctcacctcaatcgtttggcctcatcgatgaacggacgcttctcctcctcggtgagcaacttccactcggcacctagaaattaaaatattttctcattaatccattagatacatttgctcttgaagctcttgtcgaaaatctggctacaacaattggagtgcactctagaaaagctgtcgcacataaacataatgtttggttggggtcaccacccaatcccccaaaaacttgtcttgtctgtgcacgaaggataacagcaaacaatgtcgttgtcagtggttgtctgttgtctcactctgtagtccactatccatctctttctgacccgccattgt

PCR verification status

Line verified as correct.

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