| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT30544 | chr3L 14138607–14140807 (2200 bp) | Sox21b, D |
      active |
esophagus, pharynx, esophagus primordium | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | ventral epidermis primordium subset | 2 |
| 11-12 | esophagus primordium | 3 |
| 13-14 | lateral epidermis subset | 2 |
| 13-14 | ventral epidermis subset | 2 |
| 13-14 | esophagus | 4 |
| 15-16 | pharynx | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0042630 | Sox21b | 14184bp downstream | BDGP FlyBase |
| FBgn0000411 | D | 30103bp upstream | BDGP FlyBase iFly |
| FBgn0036411 | Sox21a | 37390bp downstream | BDGP FlyBase |
| FBgn0036414 | nan | 40742bp upstream | BDGP FlyBase |
| FBgn0013718 | nuf | 45363bp upstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
ccggcctcccgttctgtctgttagtctcctgcctgtctcctgtctccctctcgcctctgttgtcgtctccctctcgttgtccaagtgttaaggcattgctggaatgggctttgattaaccttaagcgcataaatagtggattcaatcagagacagtcgaggcacaagcggtcatgaggtacagtgggataatatattaaaatttatgtacctaactaactaacgaaactgtcacatgattatacattagttactttttaaatagaggagattaattatttgaaagatgctaaaaggtatatatcgaatttagtaccatttcagtacttttcagactttctaaaatttgtaaatcttttggtggaagtttgagaacttgattatttatattagtcttaattatattccattaaaaaattcatagataagtattctactagaattcataaatattttttcatacaatttctccttttcgttccactgcactttgagcaaccggtccgagtcgatcggtctccgaagtgctgctctccaactcattaggttcgattcttcttctgggggccttcagaagaaactttttgcggcaacgtcattgttattgttgttgtatctgagaaggagtgactccggttgtggttgttgttggcattgtttgcccatacggatacagtgaagactgtgtgcgcttttgtcatttgtgtggatgcaaatgcatgaatatacgttggatgaaaaaatggaaatgttgctgctctattgattattggatattgattgctggtgctgccttttaattcgaggcaggcagcaacaagcagccgccagaaagaaagaaatcattttcccccgtgaaaacattccaagacaagtggttgccagtggatgggtcgccacttggtctggccaagaccagacaggctggaaccaccagctgtgtgctggtacttttaccccgcctttcaggccacacagaaagaaatgtttcgtcattaaggaaccttttaagtaattctattttttatatatttaaccactttgtataaggtttaattttccaactatgggcattgagcatacattgtattttgggcaaattgcttttaatatctatatatcctttcaaaatgaatttatactgttgtatctcaatacagcaccaccttttttcctgtgcaatccactttaatgccatcgaaacgcatttcatacaaagtcatcgtggccgttgtagaaatgacagtcgccactttatgtggagctgatcaatggctggatcgctttggtctggctcttgtctttgagaaatgcatttccatattgttttgatctcgaaattcgttcgaatttccaacacacgacaacaattttgacagttgcatttgaaaattccgtggaactcgccggcgagataaagttaattgagttattttggccctgacagttgattagttggggcactgatcccgtaagcccggccaagacccaagacacccgtccgggcctggctaagtggaaaattattattcaagttgccccattaggctgctccttggcattgtgaacagagacccccacgcatccaacgcacacagggcaaatttcatgcaaatttatatgactttgtggcatgcccttgttgaaagtgttgttattaaggtgcgaagttttaaaagggcggagatggtttaaataaagctatgtaacgtataggtgttgtgtacttatgattataattctatttgtatttatagtttaagtgttataaatgtattaaatttaatatgcaaatatatgctcttgagtaataataaaatattacttacatttcataactcaaaagattccaatttcaaatggaagtgcttatttttttacgtttgatacagtattggtagcttggtctcttagcaacatagatttccttttgaagcatatgcttaagtttcccagagatcttccattcaggataaaagattcaattacagagatccgtgtgactttgggtcgaggaggcacaacatgtaaacaagcgaacacaagcgttgcgcaaaatgcaaaaaacccatcaaaatgatggatgacactttgatggcgtgttgcacttcaggaaaccgcaattggcaaacgccagctgccatggcaaaaaatcaaaaaaataaatttaaaatcaacaaacagtagtcaagacgatcgatg
PCR verification status
Line verified as correct.