| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT30549 | chr3L 14147375–14149488 (2113 bp) | D, Sox21b |
      active |
ventral ectoderm anlage, procephalic ectoderm anlage, midgut chamber | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | ventral ectoderm anlage | 2 |
| 9-10 | procephalic ectoderm anlage | 3 |
| 11-12 | not active | 0 |
| 13-14 | not active | 0 |
| 15-16 | ventral nerve cord subset | 1 |
| 15-16 | midgut chamber | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0000411 | D | 21335bp upstream | BDGP FlyBase iFly |
| FBgn0042630 | Sox21b | 22952bp downstream | BDGP FlyBase |
| FBgn0036414 | nan | 31974bp upstream | BDGP FlyBase |
| FBgn0013718 | nuf | 36595bp upstream | BDGP FlyBase iFly |
| FBgn0036411 | Sox21a | 46158bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tagaaaatggtttacacggcggcccataaaaaaatatgtagatcttagatattcaaaatttaaattatcttgcgatgtaagttaataggcaaaagtgcattcttagctactgaaagatcctttcaaaactcatttagctattaaaagtcaatgtatttatgttaataacaaaaacgaagtgcagaattcacacttttaaattagcttgaaggtaaatcaattttagctcccgttcaggccattttcaacgtgaaagtctttgaacacccccaccactgatattagcaaaccaactcccactgcataaccaacttcctgcaacttcgcatcttgcgtccgatgccataataataatatctaaacaagaatatttatgtatatttatttatttttatgaacccattcagtttgaggcacttggcgttgaagagaaacaatggggaatgctttattacccaacggaaaaagcacgtgcagcctgtaaagcgaacaaaaagagctggtgaccccgacggccaagatcatcgggaatcggaaaaatacgcaggagtatggctatagcctcacagaaataatgtaaaggagcgaaatgaaaagggggagcacacaaaaggtgctcgaggagatgcttttggtggcatttttgcaccgctgctaacaatatgaaaatttatacgacaagtctgtcatatttttacaaacgttataaatcacacacctcgcaacagttacacttggatggttgatggtggagatggcgatggtgatggtcgaaggagaaggcaatgcaaatattgctgcaaggcacgcgattctcaagctggttcacttttattgccctgactctcgtctcgttgcgagagttttatgagcctcatttttgccttgcggtgggtctcagttcctcacttttcttatggcaccacttctagggaatgagtcgagacgcaacttggtcgaaaatgctaatttccgaaagacacagctcaactgaaccccgtacggagttccaagccaggacaattgtcattgtcaattgtttggctgttttgtgtcgcgcggttcgcttcaaaagacactggaatagagacagtggatcggcattggcaggacaaaaaggacaattgcgtatttaaaattttaattttgcgttaaagaattgtgtctttgtcaaaaagaaatttacgggaagaaaggaagcgaatgagaccacataaagtcatattgggaggtccttcggtagcaaagagacaaaggcagcgtttagtggtaagtgtccatcaaaatagagcagggagtcccatcctttctaaaccacttgtgaaccacagtgcccagatgttcggtcttcagtcgtattcataaaatattcattatatcggttaataatgtcagcaaaacgaaagaatcagtggattaacccaattgtttctttcatccactagacttagggattatgaaaattacatataagtttgtcaaagggaattttaggatttacaatgagacaataaaatatttaaatttagttcaatatattttattcattcaaaaaatctaaatgcgttcactaaggatctaattatgcaatttggcagactataattttgaaacagcgcagcgggaaaataatttttaagtcgtgtaaagaattttgtgtcaagcaaagcggtaacaaatttgccttaattacaaccaactgtttatctccaccccttcgaatatgcaattaaaatatttcgccatgatttttctaaacaaaacaaattctttaagtgccagccacctaggcaaacccaaatcgaaaacggaatggagcccagagaccaccgagcatttagagcaattagaaggccttggcaacagaatgtgggctgggaagcaaacaaagccataaaagtagatatatcaggaaggccccacacactcgtacagtggcagcggtaattaatttacgccacttgagttttgaaaacgatttggcaacaggagagatgtgagatggcgccaagcggaaacggatatgccaaagcatgtggaaacatttgccaatgctggtacccattcataaccgtatgagtccgacgtaattaagagctccatccagccaagcc
PCR verification status
Line verified as correct.