Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT30559 chr3L 14164856–14166985 (2129 bp) D, nan activityactivityactivityactivityactivityactivity
active
A-P stripes, gap, posterior VDRC

Annotations

stageannotation termintensity
4-6A-P stripes4
4-6gap4
4-6posterior4
7-8not active0
9-10not active0
11-12not active0
13-14head subset1
15-16head subset1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0000411D3854bp upstream BDGP FlyBase iFly
FBgn0036414nan14493bp upstream BDGP FlyBase
FBgn0013718nuf19114bp upstream BDGP FlyBase iFly
FBgn0052141CG3214131567bp upstream BDGP FlyBase
FBgn0042630Sox21b40433bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ggatgtggaaaaagcgaggcaaaccactaatttgtcggccaggtcggggcgcagtattctcagcatatattgctttgacaaatgtctcgcacctaatcaaatttgatacaactgaatgagcctcgaacggcatccgtgtatgcaaataggtcctgttttgtggcactcctgttctcctgcaatcagttgtcaagttgcggctggttgcaaatttatcatcatttaatttccatttggcgttcgtgccaaatgttaatgacgctgttgagttgacaacaactcgactcgactcgactcgactcttctcttctctactcgactccactggaggcaaatcagcgttatccttgcacttacgtctgcaatttccttgctgctttgacgccctgtgctcgctgacaaattatgtcccagtcgacatcgcgcattcgccccgtgggccgcccgcttttgccgtcgctgctcatttgcctaagtgcgccgcgctttttgtgcggtggaggcttttaattaattgttagcctgcgacttattgacggtctggttggctggttagcattgcgcagcaccactgcagtggaggcaacgaaaaagggacgaaaaaaaatgtcaaactagcacttaaaaagccgccacgctttgctacttgtcaaccacgcgccgcagtcgcactgccagtcggatatatccccagctatacccacgactatagccaccctcgacaatatgcttcacgtccagacgggacgggggttgggtcgtttttgaaagaaatatgagacacgacactaacctaccaaacatgtctaaacgaagtagttattattcataattgatatttagcaattaaactttaagacatacgaatggtgtgtcttaaatataaagcacatcgatggttcagagaaataattaaagccggcaataaaaaacaataggttaacatcttagctgttaaaatattgaactaacatagaatacaattcaaagctggttttaaatctttagaataagtgcacgtataaatatacaattctgtgttcgcagagcccaaattgctttttcttttttatgtcattattttccctaactagtcccaatttgtgtagcccagtgtagcggcaaacaaccctgttaagcagttgcaaatatgaaacagtttgacaaaaagccaccacccacaaattaggctgcataacgagtgatacaaaatggggaaagggggagcatttgacagacgacagacatcgtcgccatgtttaggatatacactgctatttcggggagatccttaaatacgcagaaaactaccagagttacaaaacagagaacagcttgacccctttgcaaaacgatcttggaagagtcccgccagcaagttaatgtttatggcagccacaacccgaacgataaacataaactgaaccttccgcgtaagaaaggcatttggaaattgcacggaaaatgtggaaaatgagaacagccgacgaggtcgtcacaatgatttcactagcaaattgtatcaccgttattagctaatccgtctggtcctttgtcgctaatccggcggattagcgcgtgcatctttcgcctaaaaaagtgcacaaaaacagacggatttttgggaaaacttgaaggaaatcaatagtctggctaatccgggtccaaagttaccacaggtagccaaaacactgcacgaaaagagcaacaacaacccaaacagacagcgctagaagcataaaaatctcgcgacatttcgcacactcctttctgcggaccggacgctaatccccggtcataaagtcgtaaaaaaatcgaagcaaccgggaggctgcaaattatatttgtatacagacgtgaccaaatgggacgaaaggcgtggcttttgggagtaggaggcgtaggcgagatgggtcgtaaaacgttctcgacaatccttaaaaacccaacgagttgaaatggaatttcaattattcgtgcatcattttttttggatgaaatgtttaaactatggatcaggaaggcgtgagcgggcttatgttttaagcttggcttagtcggatggatggattgggcgtttagcgaaagttaatcacttccgtttgggttcggcaaaggcaacatccgata

PCR verification status

Line verified as correct.

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