Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT31046 chr3L 15094327–15096475 (2148 bp) CTPsyn, CR43972 activityactivityactivityactivityactivityactivity
active
brain broad, ventral nerve cord broad, ventral nerve cord primordium broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage broad1
11-12ventral nerve cord primordium broad2
11-12brain primordium subset2
13-14brain broad3
13-14ventral nerve cord broad3
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0262707CTPsynoverlapping BDGP FlyBase
FBgn0264703CR43972overlapping BDGP FlyBase
FBgn0264704CR439731726bp downstream BDGP FlyBase
FBgn0027088Aats-gly3542bp downstream BDGP FlyBase
FBgn0086690cp3096504bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

gttgatgtgcgcttgagttcgctgccgacgtcgactgcgactgcgacggcggcacatgcgtgtgcttcatttgttgtgcgttaatttcggtagtgtaagtgtgagtgggtgcgaagaagggcggtaaggatggggggtagggaaagaggaatgggaaatgggaaatggcaagggtcgccatagtggccgctgcggtgttccatcttttgagggtgtcttcttctagctgccgagtgcttgtgttgctttgtggctgctgttgttgttcttgctgcctgggcttattgcgtgtgctttgcgctccgtcatgctcccttccctatccctgcccctcccacttccccctacatcggtccatcggtcacattagcgtttttagccataaaagagccaagctcttgtgctctccgccgtccaccgcctccgcctgctgctcatcgtcctctttgtcctctctttcgcagctctgtctgcccatttggttgcggccgtcatcggcgcgtcaacatcgttagcagctgttgctctttgcctgtgcgccattaactgcaccccccaaccctctggcaccagctctcttccaccgcctttttggcctgcatttgctttgttgctggatttctgcttgcgcattcgttacgctcacgtttcgtttcgcgacgacaataatgcttgggcctttgctgttgctgctgctgccgctgttgttgttgatattgctcccacctctggctgctctgatgctcctctttccctttttttgctcacactcctgctccgccttgtgcgtgtgctgccacatacagtagtaactcactaaacgattatatggacttcaaaagcgataaatagtaaacatgtaaatatttacatactgtatgctggaatttcccactaaaaataacgaaataactgtcattaagagatctaattgtttgttagatcccttagttagatttcccttattaatatagacgatatttgtatgtatttaatttgaaaattgcataattgcacttatcgacgctccgcttatcaggcgtgcttttgttatcgcaaaaccccaaatgttggggataacttaagtatacctgggtataatacggtatttgggaattagaaattttgacgttttatggaagaggcattaagaatgagaacccttttataatttgtcctattaagcttaagtaaagtacaattttacttttagtacatttttaatttatatgaaaatcttaattcatatatattttttggataactaatggaacaatttcaaatgcttgtgttttatttcaaacttatcgggcagcaagaacggtaatggaaatagtgcgtggaaagtaaatgtgtgctaacacctctctgtatttctctcttttcaaattaggcgcgaaatttcgaaattggaattgaagcatgctagtcttgatttatttaaatcttttatacatacatcttttatacatacagtagtaacgcactaaacgatttaatagtaaatagtaataataataaatagtaaacatgtaaatacatattttatgctggaattacccagtaaaaataaccattaaactgtcattaagagatgacagttagatttcctttattaatatggaccatacttgtaagtatgtcgttcgaaatttgcttaattgcacttatcgatgctccactgtacccatgtacatatggcccgcgtgtgcacgcttttgtgcgtgtgtgcgagtgtgcaaaaattaaatggaaaataccattccgctgtggcggctctccagcccaactctccaacgacagctcgccagcaggatgtgaccgttgctacgcgttgctggcgtctgagttgagtggctgcctcccaatgccgcccctcgtccacgcctgccaccgttacgccccctcatttgctggcacacgcacacaggcacaagagcacacacacacacccactacggttaactgatgggcccgcacgtgtctgtgtgtgcgtgtgtgttctatggcttcataagcttcaatctcgcgtctggtcgaaagtttgcccacttgccataactttaagcatagcttatggatcgccgggaagttacggaacacagtagccgttagttaaattattctcatttttgttggtcccagcaac

PCR verification status

Line verified as correct.

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