Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT31167 chr3L 15324024–15326133 (2109 bp) CG43247, CR43992 activityactivityactivityactivityactivityactivity
active
brain anlage, brain anlage subset, ventral nerve cord anlage subset VDRC

Annotations

stageannotation termintensity
4-6anterior endoderm AISN2
7-8brain anlage3
9-10brain anlage subset3
9-10ventral nerve cord anlage subset3
11-12not active0
13-14not active0
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0262892CG432471322bp upstream BDGP FlyBase
FBgn0264724CR439923858bp upstream BDGP FlyBase
FBgn0036494Toll-65768bp upstream BDGP FlyBase
FBgn0036493CG725519730bp downstream BDGP FlyBase
FBgn0036492Best328140bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tcaccggggaaatgcaaagctaggggaggggaattgctttgacagcaggcacagaccaaaagtcagacttaaaactccggggaacgcaaagcggaaatgagaagattatagagtgttgaatatgaaaaaagagtcttgttgctcgcagaatttcactttcaattgtgcaacagcggttcaagggactctttaaggatattaagaatttatcggtgtcgaatttgctattagatccagatttatacctttataagaaggtttcacacgtctcaaaatattgcctaaatgaataagccgatttcaaacttactggaacggtgcaaatgtgatttttaaaagctgaatcaagccgtattattcataatctgatgatattaaaaacaaaaaattcaattatatatatttgaaaaataaatgtatagatctgctttcctagaataaggatatgccttaaagtagttttacttttctttaccttatcgttatatctttttacttaggatttctgtttgtactggacggcatcatatcattattctacccatctattttgttctttagtgtaccaacgcgtttttcttttcatggtaacaatgtccattgctgacaagttgtttcccaccgatgatctaagatatgggttaatccaacttccgttttaaactaaagtagcaagtgctaatccaaattctcgacatctagagagttaaccatctcatcttcgcccgtaaagctaccatttcaatgtgtccctgcaaatccgagccactttgttgggtaaacagaggcaaattctcaacacttttatctgagattgaaggggacataaacatccttttgaggagccggggcattcacgtatccgcatccgtatctcttggaatcgcactgcaaaccccgaggctgtcatctcgatggagatattatctaattccatattcccaccccacccacgtaaggcagttctcaatgcaaaatccaatagtcatgcagacacacacattcgaacaatccgcaattgaagaagattgagcagattgaggaattgaaaggagactccaaggtaaacacttgcggatgctcaagattagttgtggtggtggtccagctcgccagttcgccagtgtccttcgatatttgctttaaaaggacattttacagccatcggcaattcatcttgtcctttctccgcacagcaacggaaataaaaaatttgtttgccagtttgctagctgattcccaaatgtctttatgagccttgtacattgtccttttccctttttattttccaatggagcggaagcaggaagcactaacatgtaggtaaatgtcaagtcagcccatttggcagcatttttttttactcttacaattttttgtcatctgattgtttacattttggcgtattttgacaactaaattggtggtcgaaggacttcatcttatttcccacccaaggtgagccacccggcaggctctctctgcttcctataaattaaatgtcaaccgaccgtcttccgatttcagttggccacatgttcgatttccggctgccaccttttcataacccacagaactgtggccaggactacttttatgggaatcggaccgagctgagctgaactgaggcgaggcgaggagaactgaatgtggacgtctcgaaggtcgaccgggcaattacttggctaaaatgctccgtaccaactggtgcaattgcagctaccgcttttcctccttgcatccttttctcgattcgtccttggcttgtgcaattttctttgggcacaactgtcattatggactttggtcaggctgcattcaagatttgttgcaatttatatttgccgtggtggctggggaggcgaaaccgcagcctccttctgcgctcggcatgtggaaagatatttcccaataaaaattgggttagttgcggaatttccgtatattaaatattatttacctcagctttatcgcttcaattgagtcctgagacgtttttcggattttctaacattgaatagggcagtagattgcagtgagttagttttatttcttatataagatagcaagttttaaatttcttatagatttttgaagccgattccatagc

PCR verification status

Line verified as correct.

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