| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT31552 | chr3L 16036410–16038639 (2229 bp) | th, CR43951 |
      active |
head epidermis broad, ventral ectoderm anlage, ventral epidermis primordium broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 1 |
| 4-6 | dorsal ectoderm AISN broad | 3 |
| 4-6 | trunk mesoderm AISN subset | 2 |
| 7-8 | ventral ectoderm anlage | 2 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | ventral ectoderm anlage | 4 |
| 9-10 | head epidermis lateral anlage | 3 |
| 9-10 | lateral epidermis anlage broad | 3 |
| 9-10 | head epidermis ventral anlage | 3 |
| 9-10 | head epidermis dorsal anlage | 3 |
| 11-12 | ventral epidermis primordium broad | 4 |
| 11-12 | dorsal epidermis primordium broad | 3 |
| 11-12 | head epidermis ventral primordium broad | 4 |
| 11-12 | lateral epidermis primordium broad | 4 |
| 11-12 | foregut primordium | 4 |
| 11-12 | head epidermis dorsal primordium broad | 4 |
| 11-12 | head epidermis lateral primordium broad | 4 |
| 13-14 | head epidermis broad | 5 |
| 13-14 | trunk epidermis broad | 4 |
| 13-14 | foregut | 4 |
| 15-16 | brain broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0260635 | th | overlapping | BDGP FlyBase iFly |
| FBgn0264602 | CR43951 | 5925bp upstream | BDGP FlyBase |
| FBgn0036560 | CG5895 | 6084bp downstream | BDGP FlyBase |
| FBgn0260646 | CG42538 | 8458bp downstream | BDGP FlyBase |
| FBgn0005536 | Mbs | 8649bp upstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
gctgtttgagctcgactgtgggaaactattataaacactttaccattcttttagttcttactgttgttgttgccttccacaaaataaaaaaaacgagattggaatgcggtgataccagatactgtaggggcaacaacaacaacagcaagctagggttaaaaggggagaagcggagcgcatcgtgctcacaacgtgaagaagaggaagatgatgatgctaaagaatccgaagtgaaagaatccgatgaggaggacgatgaagagggaagagcggagcacacagaaggaggatgcagaaaaataaataaatgcagcacaggcaaggaacattcttgcatgatctccagcaaactgtgtgtgtgtgtgtgtctgtgtgtgcgtgagtgctgtggccttccaagaaatgcagcaacaacacaacgacaacgaccacgaccgccgacgtcgataatacgagaagaaaacagagatgggatgctggccaacaaagggcaatattgtaatcataataaatgcgccccgatccgagctgctaaagaatgcattaagatcgtctcgtagccatatatccctctctctctctctctctcattcccattgaacattgatcgattgtcgaaataactaacggcggcttggttcaaagtaccagaaccgccgacgccgccagcgtttttcctcggaaaaccaagggaaaattgttctcaaacccaaagagtcaagtcgtgtgcgaatgagatggcgaagcatttatcatcacagcagcatctctatgggacttggaatgtgggtacgatctcatggaaaagaagtgagatgaagatcaggcgtggttagtggagaggggagggaggggtgggggatgtcccctcgttagtggatataatggttgaaaggtcgtttttcacgcggtccacgctcaaaggtcgtggaggcgacgcgatgattcagctgggcgagcatcgaaaattccgggaattccgaattgtaattattctcatcttatgcctggtcttttccgggattctctttcaagggccgcggtggactggtccatttccattcatgtgctgattgccgttgcgtctgctggcgataacaaatggaacccagacgaacaaacaatagatcctattctgcttttcgaaaaaaatactactcccagcatttgtctacgtgagaactgtttgttgtgtcttaagcaccttatctatcgttttattaacgaattgtctcgactcctctcgaaatccgtttcgtgggagtgggaaaaggtgggcacagggaccaccatcgatgatgtgtgggtgcggggataatggaagttgaagaagtttgccctgcgacgtcgccatcgaaaaacaggtcaaaacttgaaatccctacaaggaaacaacagcttgttcaggcttttttaataagtttcttcgttcggttaaaacacatttataccttaaagtattaatacattttcttaacatcaaaatggaataataataataaaatcctatgagcagtattaaaaactacgagcatataacaccagtttagtactgatacaacggtttcaagaacatgatattgcgattgctatggttaccataagttcagataagagaagtccagctctatttacaaaagtcggactttattgagctgtaagccgaagctcagactcagctcgaattgagctactgagagactttctctttgttcggcgaaaaacgaacacataagttgaaagtaatgaagcaaaaaaaagagtcaccagtgtgcaaaaatgaatgctcctcaaacgcatttcagagtccgtttctatggcaatggtaatgtgttgtctttcgacttattttctgtccttttctgcagagtgaaaaacacgcatgagtgcaccacttccgttggcagcggatgttccacaaagaagctaatgctccatagtccggaattggtggtgcctccgatgacgatggtggtggtggtgggttgggccggattatgagtgtgtgcgtaaaagaggaagtacgttacacacattgtaatcgtatatagcaaatggagtactgtatgtgtatgtgtatatacccagaaaactgacgcgtcatctgtttatgcgaatgcacggtaaaaaatactgttaagaaattatattttaaactgttgttttacttgttttagcaaactactcgtttataggattcacaataatataatagcatttttcctctcga
PCR verification status
Line verified as correct.