| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT31555 | chr3L 16041647–16043743 (2096 bp) | th, CR43951 |
      active |
ventral ectoderm anlage, brain anlage subset, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | ubiquitous | 3 |
| 4-6 | dorsal ectoderm AISN broad | 2 |
| 7-8 | ventral ectoderm anlage | 3 |
| 9-10 | ventral ectoderm anlage | 4 |
| 9-10 | ubiquitous | 2 |
| 9-10 | brain anlage subset | 4 |
| 9-10 | ventral nerve cord anlage subset | 4 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral epidermis primordium subset | 2 |
| 13-14 | midgut broad | 2 |
| 13-14 | brain subset | 3 |
| 13-14 | proventriculus | 3 |
| 13-14 | malpighian tubule | 2 |
| 15-16 | brain subset | 2 |
| 15-16 | proventriculus | 4 |
| 15-16 | salivary gland | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0260635 | th | overlapping | BDGP FlyBase iFly |
| FBgn0264602 | CR43951 | 688bp upstream | BDGP FlyBase |
| FBgn0005536 | Mbs | 3412bp upstream | BDGP FlyBase iFly |
| FBgn0036560 | CG5895 | 11321bp downstream | BDGP FlyBase |
| FBgn0260646 | CG42538 | 13695bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
gctgaccacgcagagtttgggtctcgagtcgccggacaagttttagttgaaaaatccgcgggcttggagctaaacggccttgcaaggccttttaaagttgttgcaaccgccctgttcttgttggtgctgcttttaatgcacagttaaaatagcctacagcgttttaacttaatgtgttgacagctgtttaagctatttcaaacaacttgagtcactttgttgctttaataatgaaaccatgccagcattaacaagtatgactcaatagggatataccttaattttatctatatatgcatgtataatattcatttaagataaatattaaggagcgtgtcaaaagattgctgcaactttgtaattcctaagttcctcatattacatttcaaaagctatactctacagttgattctgtttatgttatattttgtggctttttattaacagccaactgcagcggagctgaaaacctgtttgccatttttgtattctcttcattcatttgtgcggcgattggcaaaaggtgtcataacaacgcgttgggcacgattcgattagactagccactacccattgcttataacatgtgctgcctgtcggtcccttttctagccaccatgtatttacctgctccattcagggccaaaaaaaaaggaaggaaagaaagcacctggatcgacaattgtggacgtgtgccggcagctgcagcaactaggtaataaccgatcagaggatcgccgaaagcggagccagcaacatctgctcctggggcaagggtcctcatccttattgtgcacgcttccagtgaaaggatcgcgcggcacatgacgacgccagctgccgtcgatcctttgtcaggatattttcggtgtgtggatgtgtggaacaatccaataatgagcctaccgaactgaggtgtcccgcggatcttttgctgtcaaatgatggagcctcaaaaaggatgtatgtatattgtatatttaagtttatggtgtagtggataaatactcaaaaataattttattcatcattttcaggggaacaccaagtgaactcatcagtgaactactatttgaagtaaggaatttgagaggttatgacattactcaagtgacctaatttcctgtgaaaccatctagtcaccgttactaggtatagattagacttgccagttgacagttgttttaaacaaatatctcacgaatgaatgacgcaaaacagaatgcagcgaggatatatgaatttcgttctagtaaaataagtgaggtaagcaactgatgctataggcaaaaccccatcaatcataggaacctacgcagcgctgtaaatggaaatgacattgagcggtaattagaaattggaaaattctagctagtaaacgcgttccacgaatgggtgggttttgcagcatgggggtggtgttgatttcatcatgaatgaaatgcgatgcgaatgagctcagcatcggcggagataaaaggtacaatcttagttaatatccaggcagaaacatgtgcgacagacagatttcattccaacccatccctcaaaatgacaagctagcacaagagcgaataagataagacgggatcctgacatatgcctaagtatgtatgtacatgtgtatctcggcctccagattgttttagaaatcactagaaaacgccagagagcggagagcgagatagggagaaagggggagagagagagagtgagagagggagggataatggtcgtgtccctgtttatgtgggggtaaggacatgaatgaaaaaaggcgtgttggagagagaaaggtagacaggcggcgcctatttgtatgcagcataattcaagtatagtaaagtaaacccattttgttttttctataaaccgcgggaagattgaacacacatatttatatttacttaccagagacattttaaacagtgataacgtatcagtttatcattggtttttttaatgccttttttcggccaccaaatcgttaattgttttcgttcacctcttatcgcaccacgataagattataaaatcacttaaaataagttttgctgtataaaatgtttacacaactgtgctcacgtcgactggtgg
PCR verification status
Line verified as correct.