Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT32110 chr3L 17124953–17127076 (2123 bp) Rbp6, CR43433 activityactivityactivityactivityactivityactivity
active
trunk mesoderm AISN subset, brain primordium subset, ventral nerve cord primordium subset VDRC

Annotations

stageannotation termintensity
4-6trunk mesoderm AISN subset3
7-8not active0
9-10not active0
11-12brain primordium subset3
11-12ventral nerve cord primordium subset3
13-14brain broad3
13-14ventral nerve cord broad3
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0260943Rbp6overlapping BDGP FlyBase
FBgn0263381CR4343335010bp upstream BDGP FlyBase
FBgn0036698CG772473321bp downstream BDGP FlyBase
FBgn0036697rogdi76400bp downstream BDGP FlyBase
FBgn0010424TpnC73F83464bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gctgcatgcaagtaaagaaattgcatacgatatttacaaatgcattaatcaattagaaactcagctttgcttgttctagcaaagttctcacaattttatgaccattgattggaaaatggattatccaaagccttaatccaattaatacaattggttggcattggattcaagtaaaaataagtacatatttctcttttacgatgttgttttattgtcttaaaggagttaaattaaattccttttgttgcattgccatcttaatcattcaatttaatctatttgcatgaagacaaaagataacgttcaaacaagcaaaataagaggcaatcaatcaattcaacacctattttattacttaataaaaagatttacgcctttcttctagctctgtggattttaatgaggcgtagcatataaataggaaagtgcaataaaatcgacactttatcacggcctttcatcgatacgcaggacggttgacaagtcgcatgcatatttcattctgacagagatgctttatcgatagcccccgacttatccagaatgtgctcatcttactcgagattcccgggatggtgggatgggggatgaaaagcgatgccgacatggccatcatctccatcatctggcgggctgagaagccgatgtctgttatgttagtgggaaaggccaaatcaatttaacactttcaactaaattattcattttgcataataattttcaaatctgtcaaaaatgtacacacacacacacacacacaagtacaccacagatacacaggattttcgaggcgtctgcactttcacacgctccgctcaggagggggcgtggcgctttcggagggcggtggcgtttgcggaacgcttcccaaaaagcactcaaataattcccgggcgtaagctaaaccagcgcaaagttgccgagagctcacaacaatggcaaacggaaattgtggtagggggttttctctgccaggcaatgaaatcgaggggtagttctttgccggcagctgcgagggatggcgggggaaataggataggggtttggtaaaatggaaaaccctttaaccgtgcgtaggctccgtcgccgtcgccgtccgccaagcgtcgcaaattctgttaagcgaaaatttcatcaacggcgcagaattttcattcgccatttagacttttgctccacctgccctgccctgctccactccactccgctcccttccttggccatcgccatcgttcgttgtcaaaatgaaaggaaaatgtctcataaatccttttaatattaaatgagctcgttctacgcgacaggctcggcccaacccgcgaaaagcgtaagggaaaatggtggaaattcgggcaacgcacacacttaaaattatgtggctaatgggagcaacttgcctggaaattgcgcgcggaactgcggagatatctcgaatcggcgacacatgttcagtgggaaaagcatgaaaatgcggaggaaaaccaagggaccggggcactctgccaattgtcattaaatgtaatttttaaaccttttagcgcatgtgtgccataaaatgtgaggttaaaaaggggttttcttttgggcctccctaggatgtccttttttctgtgctctgccatttggttttattgtgaaattagtcggcaaaagcgggtttattaaagtttaccccgaaattcctgatgcgttgcctgaattttcagcctgggcggagaagggttaaggggtgattttcaacgacaacaatttgtaacatttgccgcacttcccgcaagaattttggccgccgggggtttggatggatgaacagaaaaaaatcgacatagctggaaaacgggattggttgtaacccactcgaaaaaagagctccaacatcattcaaagtgacaaattatccatgcaaattttatacaaaataaaagggggagacccacaaaaacgcccgctgccgtgggaaaaagtgttgcatacttatgagtgttggcaaagagctccggcatgaaatgtgagcattgatagaaagtttgacaaatgccaaaggatgccatttcaggataagagccatgacggagatgaagcaaaatatatgtaggctgcttattcaagcattatctttgttca

PCR verification status

Line verified as correct.

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