Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT32275 chr3L 17437262–17439559 (2297 bp) CG18265, CG32176 activityactivityactivityactivityactivityactivity
active
dorsal ectoderm AISN subset, dorsal ectoderm anlage subset, brain anlage subset VDRC

Annotations

stageannotation termintensity
4-6dorsal ectoderm AISN subset3
4-6trunk mesoderm AISN broad1
7-8dorsal ectoderm anlage subset2
9-10ventral epidermis anlage subset1
9-10brain anlage subset2
11-12brain primordium subset2
11-12ventral epidermis primordium subset2
13-14not active0
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0036725CG18265overlapping BDGP FlyBase
FBgn0052176CG321766192bp downstream BDGP FlyBase
FBgn0036723CG122297732bp downstream BDGP FlyBase
FBgn0052174CG3217410542bp downstream BDGP FlyBase
FBgn0042641frc10973bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgatgaggttgaggttcccattccaaaacttcacataaaccttatggttacataagctcacaattaattgaacccaaacccatgtacccaccttattaactaaacaatagttgaaatgacatttcaagaatattaccagactatcctcattaggggcataattagtttaataggcttccataagaggtagttaaacaacttgcattgcttggcttaataatgcaaaggcaattgcatttcggtttataacgacttgaccgcaacatttgtggtttgtttacattccgcccactgcaaggacatgcgcctacgaaaaagaggaagcccctcttttcgggcggtacgtgcgtgcgagtgatttcagccgagtgacggcgaaagtgaaagtgccggcaccgacaacgtcacagtggacatgtgtgagagtgaaagtcggtggaaaaaccttgaccacgaccacggcgtcgagcaggtcaatgcagaccagaccgagtgggtggccgggtgggtcattcgggggtccgatccgatccgattcgattcagctgccgaccaatgagttgcccactgctccgtaccgactgttgctgctcgaccattttgcgagcctggttcgttcaaccggcgattttccatccacactcgtacacatatggccggctgctccaaaaaaaaagagagtcaccttcatcgcgcaggcgcagatcccgaagaacgccgcaggacgtttggggcatcggggcaagttactttcactttttcggcctctgatgtgtgttgaatgccgagtgccaaaagaacgggggaaaatgaaaaaaggggtggccaaggttgggcccacacgcacacacatgcacttgcagcaggcatgtccttcgaaacacaagtatctgtaagtcaatccgtcaattgggcaacgcaaacaatcactcgccgtatctctggggatagagtgtgactcagattttcactgatacaaatgttattccctttagagattcggttcagctctgacgtgatcatcaatttatttatttgtatgtttctgttttattcttgatacagaaatactacttttatgtatatgcacttatgtatttacgaggcttgttataaattattcaaaatgcttaattaattaccaaccactaaaaaaaaatcacaacaaaggttgtattttcaatagtgataatatcataattataaatagttcaaatggaggtgatttttttttcaactcaatttaaattaatcatgaattaaaacatataaatcgaaatcaattaaacgtcgtttgacttcaatacccatatcttgtaaaataaaaatgacaatacatgtaaatcaccccttaaccaactttaatttccttggttttcttttcgaaaaaaattgtttcatattcctttttggtttagatccaaaaatatcttttgtcataggattgtcagaatcttattcttcaaataaagtgcctttccaaagagttccctacaatacatttaggtaatcatgttattaaaagacaattacaaaggtcctttgacagttatccctaaaaggcatttaacatgaaactggttacctgggtgtggattctgatccctttttagtccgcagaagcccttcaattagccaatttcagcattagaggacattgagcaacccccaaaaccctttcggaaaatatttattcgattcctgactactcaagtcaagaagtttcagcctttgtgacaggaacttgaaagaaaccaaaagaaaatgcgactcttttcattgggagcgcataaattaaaataacaaaaatataactgccggaacaccaataacaacgatggtggcacacgaacttctgcagtaggaaaaacaaattgaaaatcctatcgaacaatgataaattggcacgacaacaataatatcgagggaaaaccttccaagttgcgcggttgttgctcattcgtgtgtcgccgtccctttctattgtagtcgtagttgtagttgtagttgtggtggttactgaaaatttaaaaaaaaaaaagagaggagggaaaaagaaaacgaaaaggggcggagcaataatggttttccgggcagcgctgctcagttgtcgctctatggatttttttaagggaaattctatgatttttgatattttggggtgttttattgaggttttttccgtgatatgggtaggggcccacaatgtgcatatgtgtgtgtgtgtgtgtgtgtgtgtgtgctcgcggtattaagcgatatggagggttaggcttgtgtgtgtcgccgggattttag

PCR verification status

Line verified as correct.

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