| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT32774 | chr3L 18395141–18397272 (2131 bp) | rpr, skl |
      active |
middle, yolk, posterior endoderm anlage |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | middle | 3 |
| 4-6 | yolk | 3 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 9-10 | ventral epidermis anlage subset | 3 |
| 9-10 | posterior endoderm anlage | 3 |
| 9-10 | anterior endoderm anlage | 3 |
| 11-12 | lateral epidermis primordium subset | 2 |
| 11-12 | epipharynx primordium | 2 |
| 11-12 | leading edge cell specific anlage | 2 |
| 13-14 | head subset | 3 |
| 13-14 | telson subset | 2 |
| 13-14 | leading edge cell | 2 |
| 15-16 | not active | 0 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0011706 | rpr | 3607bp downstream | BDGP FlyBase iFly |
| FBgn0036786 | skl | 36520bp upstream | BDGP FlyBase iFly |
| FBgn0262969 | CR43280 | 38689bp upstream | BDGP FlyBase |
| FBgn0265881 | CR44670 | 54358bp upstream | BDGP FlyBase |
| FBgn0265882 | CR44671 | 55160bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgtttgggtatctttttcggctgcggcttcgtttcgttaatttgtgttaattttttatgatcccaactggtggtctggtttctggtctccctttcgatcttgtcagaaatgtatatttcgttttatttgatttcccatttagaaagcccagacggggcaaagaaacaaagacaattgccaagtgatccgtagtgctcgggtcattaactcactctcctaccttttcccgtagcccctatccctatcccaaagccccttccccagcgcaatctcctctattcactcattttgtaacgcctgtcattgagggctgcttaggcagacgacccaaaccgatcccgatctccagccatccgatcgtctgggtcggaagcttaaagcgcgcaccgccgaggagctacgtttcccagacccaagacaccagaccccagtcccgattctcgggatgagtcataccgcgaacacatcggtggatgagatgggaattggatggagacgggggtttctgagcggagtccgcgcatgctctcattccacagcccaaaacgagacccatttaatgttgtttaacgactgtttgtagccggtgagttctccgcttctgttactcattaattgatcacaggtatatcagtcgtatatatttcaaacggttgtcttcatacaaaactgtattacttattatatgcaatcattattttgtttatattgtagaagcacaaatagatttattatttataagtaatattatatataataatatatatattatatataatgcatatgttatattaaagatattattttttaatattctcttaatttgaactaagaggtgttggctagtcgttagccctactccagtcacacttgcttttttgctgctgattttcgagcggcatggtggggagggcggggggccttggtgatcgtctcgccgtctggcggttgggtagaacatgtgcataactgtgttcgggattcggacactggtgctctatctatctccttttctccactcgtacacccggcgcaaaaagcgatacatgaagtggtggggaacggaaaactgatatggcgataagattgcctttggacctgcgatcgacttggagactgagggaccgaccgacccttctttggcaccgtctacggcctttgtttaatttatttgattgttctttttgtttgtctaccgaagatttgtccgtccgctcgacttgttcaaacatgtcaggttggttcttccacttttatttgagtaattttcgccctttttccatagattttcatagataacgaattttcggaatgggttttcagatttcttcactcagcgtgcatcgacgtgttcgaaggcctatttgggttcctttgtgtgtgtcctatttgctttatgtcattatttgtctttagtcttagttgcactaatattttccccatgggcagtagtcaagtgtacagcggtggagtgaggattttacatcgcctatgagtcatgctgcgagttttcattcggttcgtgtgtgtaaatgtgtggaaattagaggtgggctataaaaacggtggttaggcacctacttgattgtcatgtggaggtgcaatcatcatgcagatacatacatatccctctttatgggacatctgatggatgtacatggtcagttgagattacttatgaatatttgctattcaaagtcagtagattatgaatattttgtatatttggcaatcttttcggtaatgtgtgcaaggtttgtacatatttatggtaattaacatttttcagacttcccttttaaataaataatctgtttgtttattatcttgcttaacgcatttttctatttagcacttacatttccattttccgaatttattcaccaaacgcgaggttaagcattcttaatagccacaaccaccatcaataacgcgggcaattaaatttaatttcattccaccgagcaacaaattatgatattgatttaaataaaagtagaaacacacacagcagcgaagaaattacgataattgcttccgtgggtctggtaaaatgttgaattacaataaattatataatttaatttatatttatgagtagacaaagtcatccttctcagatacatgggaca
PCR verification status
Line verified as correct.